Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01016 ATGAAGGCTGTGCCCCTACCCTTTGAGGAATTTCGAGGGAAAGGGGTTTTGGATTTTGGCTCTGCCACTTCAGATTTGTTATTCAAGTGGAACCATAATCATCATAACAACAATATTCTTCAAGAGCATTGCTATGTGGGCACCGAGCCCACCTCTGTTTTGAACATCAGCAGAAACCCAAGCCCTCCGACATCCTCCTCCACACTGTCTTCCTCACACGGCGGTGGCGGTGGCAGCTGCAGCGGCGCCACCGGCTCCACTGATAGTTCGACGGGCGCGGCGAAGGTCTCCGGCGACAACCCACCTGCTCCTCCGGCGGCACTGGAAAGATGTGGAATGGGAATGGAGGACTGGGAGAGCGCGCTCTCTGAGTCGCCTGGTCAAGATCAGTCCATCCTGAGGATGATTATGGGGGATATTGAAGACCCATCTGTGGGATTAAGCAAGCTTTTGCAGAGTGGAACTGGTTCTCATCAAGATGTGGTCGATTTCAATGGTGGAGGAGGAGGTGGTGGGGGTTTCGGTGCTGTGGATCAAAGCTGTGTTCTTGACCATATTTCTGGTGCTACTTTTGCAAGCGGCATTGACGCCTCTGGAACTCCTTCTGGGAATTGTTCTGATTTTCCTTTTAATACCATCCACAACGTTAGCTTTAATATTAATATGGCGAGAGTTGATTCTTCTGTGAATCAAAATCCCATTTTCCCTCCGTCGCTTCCTCCGGCTATGTTTCAGCCTCAGCAACACCAACAAGCTATGGAGTCTCTGGACGAGAAGCCACAAATCTTCAATCCCCAGTTCATTCTGAACCAAAATCAGGCTCAGTTTATGCAGAATCCAGCTTTTGTTATGCCGCTACCGTATGAACATCAGCTTCTTGCTCAGCCTCCGGCCAAACGGTCTAATTGCGGTCCTATCAGACCAAACTACCAGATTCTGAAGCCGCCATCTCTAGATCCTGAACAGGAGATGTATCTCCGGCGGGGGCAACAACCTCTCATTCAGCTGCTTCCTTATCATCTACAGCAGCAACGACCGGGGATGGCTCCGAAGCTGAAAATGGCGAGCCCTGGCGAAGAACTGGTGAGCCACCAGCTTCAGCAGAGTGTTATGGACAAGCTGTTTAAGGCCACAGAGATGATCGAAACCGGTAATCCGGAACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAACTTTCCCCAATTGGTAAGCCTTTTCAAAGGGCTGCTTTTTACATGAAGGAGGCTTTGCAATCGCTTCTTCTCCATTTGAACAACACCACCACCACTACCACCAACAATTCTTTGACCTTCTCTCCTAGTGACCTTGTCCTCAAGATTGGAGCTTGCAAATCGTTCTCCGAAATCTCCCCTATTCTCCAATTCTCCAATTTCACTTGTAACCAAGCACTTCTTGAAGCTGTTGAAGGATATGATCGAATTAATATAATGGATTTTGACATTGGGTTTGGTGGACAGTGGGCTTCCTTTATGCAAGAACTAGCTCTCAGAAATGGTGGTTCACCTTCTCTGAAAATCACAGCCTTTGTGTCTCCCTCCAATCATGATGAAATTGAGCTCAGTTTCACTCATGAAATTCTTAAACAATATGCTTCTGATCTTAGCATACCCTTCGAGCTTGAGATTGTAAGCCTTGAGTCATTGAACACTGCTTCTTGGCCACAACCTCTTCGAGACTCTGAAGCCATTGCTGTTAATTTACCCATTGCTTCCTTCTCACATTGCCCATCATATCTTTCTTTAGTCCTTCGATTTCTGAAGCAGGTCATGCCAAAAATTATTGTCACTGTGGATAGGTCTTGTGATCGAACTGATGCACCATTTGCTCAGCACCTGATTTATGCGCTACAGTCTTATTCAGTGCTTCTTGAGTCGCTTGATGCTGTTAGTGTGAACCTTGATGTTGTTCAGATGATTGAGAAGTACCTTGTTCAACCAGCAATAGAGAAGCTGGTTTTGGGTCGCCACAGGTTGCAATTGCAAGAAAGAACATCACAGTGGAGAACGCTACTTCTCACATCCGGGTTTTCACCATTGACACTGAGTAACTTCACAGAATCTCAAGCAGAATGCTTGGTCCAGAGGAATCCTGGAAGGGGATTTCATGTGGAGAAGAAGCAGTCTTCTCTTGTTCTATGCTGGCAGAGGAAGGAACTAATCTCAGTTTCAACATGGGGATGCTAA 2208 0.4728 MKAVPLPFEEFRGKGVLDFGSATSDLLFKWNHNHHNNNILQEHCYVGTEPTSVLNISRNPSPPTSSSTLSSSHGGGGGSCSGATGSTDSSTGAAKVSGDNPPAPPAALERCGMGMEDWESALSESPGQDQSILRMIMGDIEDPSVGLSKLLQSGTGSHQDVVDFNGGGGGGGGFGAVDQSCVLDHISGATFASGIDASGTPSGNCSDFPFNTIHNVSFNINMARVDSSVNQNPIFPPSLPPAMFQPQQHQQAMESLDEKPQIFNPQFILNQNQAQFMQNPAFVMPLPYEHQLLAQPPAKRSNCGPIRPNYQILKPPSLDPEQEMYLRRGQQPLIQLLPYHLQQQRPGMAPKLKMASPGEELVSHQLQQSVMDKLFKATEMIETGNPELAQGILARLNHQLSPIGKPFQRAAFYMKEALQSLLLHLNNTTTTTTNNSLTFSPSDLVLKIGACKSFSEISPILQFSNFTCNQALLEAVEGYDRINIMDFDIGFGGQWASFMQELALRNGGSPSLKITAFVSPSNHDEIELSFTHEILKQYASDLSIPFELEIVSLESLNTASWPQPLRDSEAIAVNLPIASFSHCPSYLSLVLRFLKQVMPKIIVTVDRSCDRTDAPFAQHLIYALQSYSVLLESLDAVSVNLDVVQMIEKYLVQPAIEKLVLGRHRLQLQERTSQWRTLLLTSGFSPLTLSNFTESQAECLVQRNPGRGFHVEKKQSSLVLCWQRKELISVSTWGC 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01016 735 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 330 730 IPR005202 -
Accr6g01016 735 MobiDBLite consensus disorder prediction 53 109 - -
Accr6g01016 735 Pfam GRAS domain family 372 733 IPR005202 -
Accr6g01016 735 MobiDBLite consensus disorder prediction 53 96 - -
Accr6g01016 735 ProSiteProfiles GRAS family profile. 361 734 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01016 Accr-Chr6 27222166 27224373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01016 370 735 GRAS Transcription Factor Family AT4G00150 56.793 2.24e-136 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr6g01016 GRAS 3.4e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01016 - - pcin:129288535 1172.92