Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01010 ATGTTGTTTTCTTCTTCACATGTTCCTCTCTGGCTTCAAGTTCTTCTCACCGAGAAATTCTATAACGCTTGTATAATTCACGAGGAAGCGAAGAAGAACGAGAAGAACGTGTACTGTTTGGATTGTTGTACCAGCCTTTGCCCTCACTGTTTGCCCCCTCATCGTTCTCACAGACTCTTGAAGATTAGAAGATACGTTTATCACGACGTTATAAGGCTTGATGATGCTGCCAAGTTAATTGACTGCTCTTTTGTTCAATCGTATACCACGAACAGTGCAAAAGTGGTATTTTTGAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGTACCTGTGACAGAAACCTGCAAGACCCATACCAATTCTGCTCTCTCTCCTGCAAGATCGATTACCTTTTGAGGACAAAGAATGGCCTTTCTGGGTACTTGTTCGAGTGCACCTATTTGCCCTTGCCTGATTCTGGCTTCGACAACGGCGGCCTCATGACCCCTGACTCGGTACTCGAGCCGGCCGGCTCGAACCGGACGACCTCGTCCGGTTCGGGTGGCTACGGCGGGGTGGACTGCAGGGCGTCGCTGCTCTCCACGGCCACGACGGAGATTGTCCGGAAGAAACGGAGCAGCGGAGGCGGCATTGCGGGCTCGGTGTTCAGAGTTGCGTGTCGGCCGGCGTGTTCACCGGTGTCGGAGATCTCGGTTAGTCTGATGAACCGGAGGAAGGGGACACCCCAGCGGGCCCCGCTGTATTGA 765 0.5242 MLFSSSHVPLWLQVLLTEKFYNACIIHEEAKKNEKNVYCLDCCTSLCPHCLPPHRSHRLLKIRRYVYHDVIRLDDAAKLIDCSFVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRNLQDPYQFCSLSCKIDYLLRTKNGLSGYLFECTYLPLPDSGFDNGGLMTPDSVLEPAGSNRTTSSGSGGYGGVDCRASLLSTATTEIVRKKRSSGGGIAGSVFRVACRPACSPVSEISVSLMNRRKGTPQRAPLY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01010 254 CDD Bbox2 24 62 - -
Accr6g01010 254 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 253 - -
Accr6g01010 254 ProSiteProfiles Zinc finger B-box type profile. 19 62 IPR000315 GO:0008270
Accr6g01010 254 Pfam PLATZ transcription factor 63 134 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01010 Accr-Chr6 24934327 24936015 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Accr6g01010 PLATZ 6.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01010 - - pvu:PHAVU_008G142900g 426.017