Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01002 ATGTATTTGATAGGTTTGAGAGAATATAATCAGAATGAGCAGCTCTGGAATCTATGTGAAAGACTTGTGGCTGATATCCCCCGTGAGGGGGAAAGGGCCTTCTATTTCATACAGGGGCATTTGGAACAACTAGGTTGTTCTAGAAAGCAAGAATTCCACCCTGGAAGTGCTCATTTTAATCTCCCTTCTCAGATTCTTTGCAGAGTTATAAACATTCAAATTTTGGTTGAACCAAGCACTAATGAAATTTACTTTCGCATAACTCTGCTCCCTGACATAGATACTGATCGGACAGTTCCAGATCCAACCCCACCTAAAATACGAAAACATGAAATGTACTCATTTTGGAAAATATTAATGGCCTCCATTACTAGTGCACATGGAGTTTCGGATAGGCAACGAAGTCCTATTCCTTCATCTGTGATTCCAAGCCAGAGTCATATAGGAGTACTTGCGACTGTGTCACATGCAGTCATGAGTGGCACTATGTTTGTGGTCTATCAAAAACAAAGGGCTAGTCAGTTTGTTATTCGTTTGAACAAATATTTAGAGGCAATGGACAATGACATTTATGTTGGAATGAGGTTCAAGATGGGATTTCAGAGAGAGGACTCACTTGATGAGATAAGTTGCTTCGGCACTTTTGTTGATGTTGGGGATTTCTCTCCTGAATGGCCAGGATCCAAATGGAGATCTTTGCAGGTTCAGTGGGATGAACCTGCTACAACCCCAAGGCCGGAGAACATTTCCCCTTGGGAGATAGAACCTATTGCAACATTTAACAGCAAAAGTTTCAAACCTTATCACAATCTGTCTTCTGGAAGTACTTCCAACTCACCTACCTCAATTTTTCTTTCTAAACCTGAAACAGAAAAAGCCAGTACATTAGCACTAAGAAGCTTTTGTAACTGGTTTTGCTGCTGTTTCAAGTAG 933 0.4073 MYLIGLREYNQNEQLWNLCERLVADIPREGERAFYFIQGHLEQLGCSRKQEFHPGSAHFNLPSQILCRVINIQILVEPSTNEIYFRITLLPDIDTDRTVPDPTPPKIRKHEMYSFWKILMASITSAHGVSDRQRSPIPSSVIPSQSHIGVLATVSHAVMSGTMFVVYQKQRASQFVIRLNKYLEAMDNDIYVGMRFKMGFQREDSLDEISCFGTFVDVGDFSPEWPGSKWRSLQVQWDEPATTPRPENISPWEIEPIATFNSKSFKPYHNLSSGSTSNSPTSIFLSKPETEKASTLALRSFCNWFCCCFK 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01002 310 FunFam Auxin response factor 189 261 - -
Accr6g01002 310 Gene3D - 189 263 - -
Accr6g01002 310 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 128 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr6g01002 310 Pfam Auxin response factor 154 234 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01002 Accr-Chr6 23625817 23627500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01002 14 258 B3 DNA Binding Superfamily AT2G46530 34.731 9.77e-52 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01002 K14486 - pcin:129316547 180.644