Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00999 ATGAGGAAGATTCGAGGATTTAAGCTTGGACGACGCCTTATCCGAATCTCCAGATGGATCTTCCATAGAACCCGACCCGGAGGATATCGGAGGTTGGGTTCGAATGATTCGCCGGCGACGAGGACCGTAGCGAAGATTCTCAAATGGGGACGCAAACTTACGAGAGGAGCCAGATCCCTCTGCAGCGCGAAGCCCCGATTGGGGTATATCCCTGTGGGATCCGATCCGGTTCAAGACAAGCCTCCCGCAGTTCCGAAGGGTCACTTGGCGGTGTACGTTGGGCAGAAGGACGACGAGTTTCACCGTGTGTTGGTGCCGGTGATCTACTTCAACCACCCCTTGTTCGGAGAGTTATTGAGGGAGGCGGAGGAGGAGTTCGGGTACAACCATCCCGGCGGGATTACGATTCCGTGTCCGTTCACCGAGTTTGAACGGGTCAAGACCCGAATAGCATCCGGGTCAGTCACCGGAACACGCTGGAAATTGGCGCGGAGGGGGCTTCATTGA 507 0.5621 MRKIRGFKLGRRLIRISRWIFHRTRPGGYRRLGSNDSPATRTVAKILKWGRKLTRGARSLCSAKPRLGYIPVGSDPVQDKPPAVPKGHLAVYVGQKDDEFHRVLVPVIYFNHPLFGELLREAEEEFGYNHPGGITIPCPFTEFERVKTRIASGSVTGTRWKLARRGLH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00999 168 Pfam Auxin responsive protein 64 147 IPR003676 GO:0009733
Accr6g00999 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 61 145 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00999 Accr-Chr6 23405131 23405637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00999 81 143 Calmodulin-binding Proteins AT3G43120 50.794 2.05e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00999 K14488 - pop:7497353 229.18