Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00992 ATGGAAGTGGTACCTTGTTCACTAAGTACGTTTCTTCTTCTACTTCTTCCCTTTCTGCTTTCCTCTTATTGTGCCCATGGCTACTCATTAACCGAAGTCAAATCATGGTGTAGCCAAACCCCTAACCCTAAACCATGTGAGTACGTCTTGGGCTCCAAGACTTACAACAAACCCATAAAGCAAAAATCAGATTTCTTCAGGGTTTCAGTTGACCTTGCTCTTGATAGTGCACGAATGGCTCTAAATAAGACTCTCTCCCTTGGCCCTAAATGTAGAAACGCACGTGAGAAAGCTGCCTGGGCTGATTGCCTTGAGCTCTATCAGCAAACCATAAGCAGACTCTCAAAAACTGTTCATGGCAAATGCACCAAAGTTGATGCTCAGACATGGCTCAGCACGGCTTTGACCAACCTCGAAACTTGCATGTTCGGCTTTTACGATCTCGGAGTTACAGTAGACTATGTGCTGCCAATGATGTCCAATAACGTTACTCAATTGCTAAGCAATGCCTTGTCTCTTAACAAGGGCCCATCATCAAACGCTGCTACGTCAAGTTTCAAAGGTGGGCTCCTGGCCTGGGTCAAGGCGGGTGAACGGATGCTGTTGCAGGCTTCTTCACCGGCTTCTCAGGCGAATGTTGTGGTGGCTAAAGACGGTTCAGGGATGTACAAGACCTTGAAGGAGGCCGTAGATGCTGCGCCGAAGAGTAGCACGGGAAGGTATATCATATATGTGAAGGCAGGAGTCTATAATGAACAAGTTGAGGTAACACAAAATAATATTATGTTGGTGGGAGATGGTATTGGACAAACTATAATCACCGGTAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGTTCTGCTACTGTTGCTGCTGTTGGAGATGGATTTATTGCTCGAGACATGACATTTAGAAACACAGCTGGACCATCAAACCAACAAGCCGTGGCATTCAGATCAGGATCGGATCTCTCAGTGTTCTACCGATGTAGCTTCGAGGGATACCAAGACACACTCTACGTTCATTCCCAAAGACAATTCTATAGGGAATGTGACATTTATGGCACAGTTGACTTCATCTTCGGCAACGCGGCTGTTGTTTTCCAAAACTGCAATCTCTATGCAAGAACACCACCTCAAAAGACCATCACATTCACGGCTCAGGGCCGAACCGACCCAAATCAAAACACGGGCATTATCGTTCACAACTCTAAGGTCACAGGCGCCTCGGACTTTAACTCTAACAACGTTAAGTCAAACCTTGGAAGGCCGTGGCAGAAGTATTCTAGAACAGTATTCATGAAGTGTTCTCTTGATAGTTTGATTGACCCAGCAGGATGGATGCCTTGGAGTGGTAGTTTTGCTTTGGACACATTGTACTACGCTGAGTACGCAAACACAGGATCTGGCTCTTCCACTTCAAATAGGGTTAAGTGGAAGGGTTACCATGTAATTGATGCTTCTGAGGCTTCTCAGTTCACTGTTGGTAACTTTCTTTCTGGGAATTCTTGGTTACTTGCCACTGGCGTGCCTTTCACTTCTGGTCTTTGA 1554 0.4588 MEVVPCSLSTFLLLLLPFLLSSYCAHGYSLTEVKSWCSQTPNPKPCEYVLGSKTYNKPIKQKSDFFRVSVDLALDSARMALNKTLSLGPKCRNAREKAAWADCLELYQQTISRLSKTVHGKCTKVDAQTWLSTALTNLETCMFGFYDLGVTVDYVLPMMSNNVTQLLSNALSLNKGPSSNAATSSFKGGLLAWVKAGERMLLQASSPASQANVVVAKDGSGMYKTLKEAVDAAPKSSTGRYIIYVKAGVYNEQVEVTQNNIMLVGDGIGQTIITGSKSVGGGTTTFRSATVAAVGDGFIARDMTFRNTAGPSNQQAVAFRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARTPPQKTITFTAQGRTDPNQNTGIIVHNSKVTGASDFNSNNVKSNLGRPWQKYSRTVFMKCSLDSLIDPAGWMPWSGSFALDTLYYAEYANTGSGSSTSNRVKWKGYHVIDASEASQFTVGNFLSGNSWLLATGVPFTSGL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00992 517 PANTHER PECTINESTERASE 19 506 - -
Accr6g00992 517 Pfam Plant invertase/pectin methylesterase inhibitor 33 173 IPR006501 GO:0004857
Accr6g00992 517 SMART PMEI_2 28 173 IPR006501 GO:0004857
Accr6g00992 517 NCBIfam pectinesterase inhibitor domain 9 175 IPR006501 GO:0004857
Accr6g00992 517 FunFam Pectinesterase 206 517 - -
Accr6g00992 517 SUPERFAMILY Pectin lyase-like 206 516 IPR011050 -
Accr6g00992 517 ProSitePatterns Pectinesterase signature 2. 354 363 IPR033131 -
Accr6g00992 517 Pfam Pectinesterase 212 503 IPR000070 GO:0030599|GO:0042545
Accr6g00992 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 175 IPR035513 -
Accr6g00992 517 Gene3D - 207 517 IPR012334 -
Accr6g00992 517 CDD PMEI-like_3 35 179 - -
Accr6g00992 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 176 IPR035513 -
Accr6g00992 517 ProSitePatterns Pectinesterase signature 1. 237 256 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00992 Accr-Chr6 23210485 23213976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00992 13 517 Carbohydrate Esterase AT2G45220 64.118 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00992 K01051 - gmx:100782892 753.436