Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00984 ATGTCCTCTCTGCTTCTTCTCTACCTTCCTCTTCTACTCTCCCTCTTCCCCATTATTCTCGCTTCTTCCTCACAGCTTGACACTCTCATGGCTATCAAATACTCTCTCGACCCACATAGCCGTTATCTGACCTCCTGGACTCCATATTCCGACCCATGTACCGGCGCTTTCGACGGCGTAGCATGCAACGAGCAAGGCCGCGTCGCCAATATCTCGCTCCAAGGAAAGGGTCTCTCCGGCAGCCTTCCGGCGGCCGTCGGTGAGCTCAAGAGCTTGACCGGTCTCTATCTCCACTTCAATGCTCTAACTGGTACGATACCCAAGGAGATTGCGAATTTGAGTTACCTTACTGATTTGTACCTCAATGTGAATAATCTCTTCGGCGATATCCCTCGTGAGATTGGAAATATGTCTAATCTTCAAGTTTTGCAGCTTTGTTATAACAAATTTACAGGGAGTATTCCAACAGAATTGGGAAACTTGGAGAGACTTGGTGTTCTTGCTCTGCAATATAATGAGTTGAGTGGTGCTATTCCTGCTAGTTTGGGTCAGTTGCAGTCATTAACGAGGCTGGATCTGAGCTTTAATAACCTTTTTGGCCCTATTCCAGTGAGACTAGCAGATGCTCCCAAACTAGAAAGCCTTAATATTCAGAACAATTCTCTCTCAGGCAATGTCCCTGCAGCTCTTAGAAGACTGAGAGGCGGTTTCCAGTACATCAACAACCCTGGCTTATGTGGGACTGAATTTACCAGTTTAGTTGCTTGTAAATCTTTATTTGACCCTAGTAAGCCTGAACCATTCGAACCTGATAACTTTTCTACAAAGGGTCTTCCGGCATCAGTTGAACCAAAGGCTGAAAAGTGCAGTGATGAAACCCACTGTAAAAAGTCAATGCAATATTCAAGAATGGGTTTGGTTTTTGGAGTGATCGGAATTATTGTCGCTTCCACAGTTTCTATGCTTTCCATGTTTGTGTGGTTTCGTCGTCAAAAACAGAAGATTGAAAGCACTAATAATGCTTCTGATAGCCATGTTAGCCGGAAAAATGCAGCTCCTTTGATTAGTTTAGAATATTCTAATGGATGGGATCCATTAGCCAAAGGTAAAAATACTTATTCCCAGGAAATTCTAGAGAGCTTTATGTTCAATCTAGAGGAGGTAGAATGTGCTACTCAATGCTTCTCCGAGGCGAATTTGTTGGGGAAGAGTAACTTGTCAGGAATTTACAGGGGAATTTTGAGAGATGGTTCAGTTGTGGTTGTAAAATGCATCAACATGACAAGCTGCAAGTCTGATGAAACTGAGTTCTTGAAGGGGTTGAAGATATTGACCTCATTAAAACACGAAAATATTGCTCGCATGAGAGGTTTTTGCTGTTCTAAAGGCAGGGGAGAGTGCTTTCTTGTTTATGATTTTGCCCAAAATGGAAATTTGTCTCAGTATTTGGATCTCAAAAAAGGAGATACTAAGATTCTAGAATGGTCTGCCAGAGTATCCATCATCCATGGTATTGCTAGAGGTATTGGTTATCTGCATGGAAAGAAGGGAAGAAAACAGGCTCTAGTTCACCAGAATATATCAGCTGAAAATGTGCTTCTTGATGCACATTGCAATTCATTACTTGCAGATTCAGGGTTGCACAAACTCCTTGCTGATGATGTTGTCTTCTCCGCCCTTAAAGCTTCTGCTGCCATGGGATACCTTGCTCCGGAATATTCCACCACTGGTCGCCTAACCGAAAAGAGCGACATGTATGCTTTCGGGGTGATAGTTTTCCAGCTTCTAACTGGAAAGAGCGATATTACTCAGTTATATCATTACCAGGCACAAGCATATGGTTTTAATGACATTGTTGATGTAAACCTTGAAGGAAGATTTTCAGAATCTGAGGCAGCTAAACTAGGGAGCATTGCTCTACTTTGCACGCATGAATCACCCCATGAACGACCATCTATGCACCATGTAATGCAAGAACTGTCTGAGAAGTAG 1992 0.4292 MSSLLLLYLPLLLSLFPIILASSSQLDTLMAIKYSLDPHSRYLTSWTPYSDPCTGAFDGVACNEQGRVANISLQGKGLSGSLPAAVGELKSLTGLYLHFNALTGTIPKEIANLSYLTDLYLNVNNLFGDIPREIGNMSNLQVLQLCYNKFTGSIPTELGNLERLGVLALQYNELSGAIPASLGQLQSLTRLDLSFNNLFGPIPVRLADAPKLESLNIQNNSLSGNVPAALRRLRGGFQYINNPGLCGTEFTSLVACKSLFDPSKPEPFEPDNFSTKGLPASVEPKAEKCSDETHCKKSMQYSRMGLVFGVIGIIVASTVSMLSMFVWFRRQKQKIESTNNASDSHVSRKNAAPLISLEYSNGWDPLAKGKNTYSQEILESFMFNLEEVECATQCFSEANLLGKSNLSGIYRGILRDGSVVVVKCINMTSCKSDETEFLKGLKILTSLKHENIARMRGFCCSKGRGECFLVYDFAQNGNLSQYLDLKKGDTKILEWSARVSIIHGIARGIGYLHGKKGRKQALVHQNISAENVLLDAHCNSLLADSGLHKLLADDVVFSALKASAAMGYLAPEYSTTGRLTEKSDMYAFGVIVFQLLTGKSDITQLYHYQAQAYGFNDIVDVNLEGRFSESEAAKLGSIALLCTHESPHERPSMHHVMQELSEK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00984 663 Gene3D Phosphorylase Kinase; domain 1 366 473 - -
Accr6g00984 663 FunFam Protein NSP-INTERACTING KINASE 2 135 257 - -
Accr6g00984 663 SUPERFAMILY Protein kinase-like (PK-like) 373 659 IPR011009 -
Accr6g00984 663 ProSiteProfiles Protein kinase domain profile. 395 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00984 663 FunFam Leucine-rich repeat receptor-like kinase 24 133 - -
Accr6g00984 663 Pfam Leucine rich repeat 138 198 IPR001611 GO:0005515
Accr6g00984 663 SUPERFAMILY L domain-like 25 233 - -
Accr6g00984 663 FunFam Protein NSP-INTERACTING KINASE 2 367 473 - -
Accr6g00984 663 Gene3D Ribonuclease Inhibitor 20 254 IPR032675 -
Accr6g00984 663 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 662 - -
Accr6g00984 663 Gene3D Transferase(Phosphotransferase) domain 1 474 663 - -
Accr6g00984 663 CDD STKc_IRAK 401 662 - -
Accr6g00984 663 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Accr6g00984 663 Pfam Protein tyrosine and serine/threonine kinase 399 660 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00984 Accr-Chr6 22976465 22980330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00984 9 508 Miscellaneous Gene Families AT4G22730 49.046 2.93e-175 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Accr6g00984 PK_Tyr_Ser-Thr 1.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00984 - - jre:108981102 892.493