Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00980 ATGGCTAAGGTTGTATTTGACAAATTTCACTCTCGATTTGATAGTTGTTGCTTTATTGAAAATTTAAGAGAAGAGTCTGAAAAATATGGATTAAAGTATATTCGGGATAAACTTCTCTTCGAATTATCAAAGGATACAACTCTTGGGAGATTCTACCATAAAAAAGTCTTCATAGTGCTTGATGATGTTAGTAATACAAATCAATTAGACTACTTGCAAAATGATGCTCCTTCATTGGCATCTGGGAGTAAAGTCATCATAATAAGTAGAGATAGACATATACTTAATGGAAGGGTTGACAAAATACATGAGGCCACAGCATTGAGGTATTACAACTCTCTTCAACTTTTCAATCTCAAAGCCTTCCGCAAACATGATTGCGAAAGTGAATATAAAGAATTGGTTGACAAAGCAATTGATTATGCCAAAGGGAACCCATTAACCTTGACCACTTTGGGTTCGTTTCTTTATTCCAAAACTGTACAGGAATGGGAAAGTGCATTGAGAAAATTAGAAACGACAGCCAATAAAGATATTCAAGGTGTGTTAAGATTGAGTTATGATGGACTTGATGATGAAGAGAGAGAAATCTTTTTAGACATTGCTTTTTTCTTGAAAGGTGAATCTACGAGATATATAATGGCCGTGCTAGAGAGATGTGGCTTTCACACAAGCATTTGTTTGAGAAACCTTGTGGATAAGGCGCTCATAAGTATTGACTTTGTGGTACATATGCATGATTTAATTCAATCAATGGCTTTTGAAATCGTTCGTCAAGAGTGTGTGAAAAATCCTGGAGGACGTAGTCGACTACAAAAACCTGATGAGGTCTATGATGTGCTAAAAAGTAATAAGGGAAGTGATGCGATTCAAGGCATGAGTTTGGATTTGTCTCAAATTAGATATTTACAATTGAGTGCTGATGCCTTAAAAAAGATGACTAATTTAAGGTTTCTAAAGTTCTATACACCCATGCATAAAATGTCGTGTACTGTGCATCTACCTTCAGGGCTTGTTTCATTTTCCAATCCATTAAGGCATCTTCAGTTGGACAAATTTTCTCCAAAGTCTCAACCATTATCATTTTGTGTTGAGAAGCTAGTTGAAATTCACATGCGAGGGATCCAATCTAGAAAACTATGGGATGGCGTGCAGAACTTGGTGAATTTGTTGTGTATAGACCTTTCTGAATCTGAACACTTGATAGAGTTGCCGGATCTCTCTTTGGCTCAAAATCTTGAAAGTCTACATATTTATTGGTGTCGAAATTTGTGCTATCTTGATCCATCTATTTTATCTCTTCCAAGATTGAAATATGTGGAACTCGAGTTTTACCAATTCCTGACCAGTTTGATATTTGAGAATGAATCAAAACCTCTCTTAAGACTATGTCTCCAGGAAGTTTCGGTTTCATCACATGAATTAGAGGAAACAAGTGTTGAGACATTGGACATTTCAATTGGGTGTATGGAGTATTCTCTCAACGGCTTAACACTAATGAATCTTACAATTAATGAGACTAGCAGCATGGGATCTTTTCTAACGTTGGATCTTTATGGTTGGGGAGAAATAACTTACAAATCAAAGCTTCACACCTTATTTGATTATTTGCTATCTCTAGAATCAATTTGTTTGAAAGGGATAAGCGAATTAATTGAACATCCAAACAATATCAAGCATATCTCCAGGCTAAAATCTCTTGACGTAAGTGATTGCAAGAACCTTCAATCTTTACCAGATTTGCCACCATCCATAAAATCTGTCATAGCTGATGGTTGCATATCACTGGAGATTGTACCCATTTCAATAACTAGTGCACCACAACTAAGGTTTCTATTTCTGCAAAATTGCTTGAAATTGAAGAACGACTCTTTATCTTGTGTTATGGAATGGGCTTATTTCTCATTGAAGCAATCAGCGCGCACAAATGAAAAAAGTTTTGTTTGTTACCCAGGAAGTAAAGCTCCAGAGTGGTTTACATTTAGTCAGGAAACAAAGGCTTCCAACTATATAACTATTGAACTTCCACCTTCCACGAACGACCTAGCTGGCTTCATTTTCTGCTCTGTTCTTTCTCATGTCTCTGATGGTTATTACTACTTGCAATGCCAGCTTTATTATGATGGTAAGCCGTGCGAATGCATTGAATTTGATTTGAAGATGAAAAATTTGGATTCACATCATGTTCTTCTATGGTGTGACTCTTACCCAAGTGCATACTTCATTAAAACAATGGACGATAAAAACACCAATTACATGCCAAGTGTGTTAGTTGAATTCTCAATTGTTTCATGGGATGATGATGATGATGGTGTGATTGAAGCTTGTGGAGTATGGCCAATATATTCCTCAGATACAAAGAGTTCCTTCAAGAAAAGGAATTGA 2385 0.3618 MAKVVFDKFHSRFDSCCFIENLREESEKYGLKYIRDKLLFELSKDTTLGRFYHKKVFIVLDDVSNTNQLDYLQNDAPSLASGSKVIIISRDRHILNGRVDKIHEATALRYYNSLQLFNLKAFRKHDCESEYKELVDKAIDYAKGNPLTLTTLGSFLYSKTVQEWESALRKLETTANKDIQGVLRLSYDGLDDEEREIFLDIAFFLKGESTRYIMAVLERCGFHTSICLRNLVDKALISIDFVVHMHDLIQSMAFEIVRQECVKNPGGRSRLQKPDEVYDVLKSNKGSDAIQGMSLDLSQIRYLQLSADALKKMTNLRFLKFYTPMHKMSCTVHLPSGLVSFSNPLRHLQLDKFSPKSQPLSFCVEKLVEIHMRGIQSRKLWDGVQNLVNLLCIDLSESEHLIELPDLSLAQNLESLHIYWCRNLCYLDPSILSLPRLKYVELEFYQFLTSLIFENESKPLLRLCLQEVSVSSHELEETSVETLDISIGCMEYSLNGLTLMNLTINETSSMGSFLTLDLYGWGEITYKSKLHTLFDYLLSLESICLKGISELIEHPNNIKHISRLKSLDVSDCKNLQSLPDLPPSIKSVIADGCISLEIVPISITSAPQLRFLFLQNCLKLKNDSLSCVMEWAYFSLKQSARTNEKSFVCYPGSKAPEWFTFSQETKASNYITIELPPSTNDLAGFIFCSVLSHVSDGYYYLQCQLYYDGKPCECIEFDLKMKNLDSHHVLLWCDSYPSAYFIKTMDDKNTNYMPSVLVEFSIVSWDDDDDGVIEACGVWPIYSSDTKSSFKKRN 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00980 794 Pfam NB-ARC domain 53 180 IPR002182 GO:0043531
Accr6g00980 794 Gene3D - 108 191 IPR042197 -
Accr6g00980 794 Gene3D Ribonuclease Inhibitor 464 630 IPR032675 -
Accr6g00980 794 Pfam C-JID domain 650 786 IPR045344 -
Accr6g00980 794 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 610 IPR044974 GO:0006952
Accr6g00980 794 Gene3D Ribonuclease Inhibitor 287 453 IPR032675 -
Accr6g00980 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 201 IPR027417 -
Accr6g00980 794 Gene3D - 1 102 IPR027417 -
Accr6g00980 794 PRINTS Disease resistance protein signature 142 156 - -
Accr6g00980 794 PRINTS Disease resistance protein signature 50 64 - -
Accr6g00980 794 PRINTS Disease resistance protein signature 559 575 - -
Accr6g00980 794 SUPERFAMILY L domain-like 245 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00980 Accr-Chr6 22785957 22788537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00980 1 620 WRKY Transcription Factor Family AT5G45050 28.593 2.18e-54 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00980 - - pcin:129289671 644.039