Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00947 ATGGAATGTCAAGGACAAGCATTGCTCTTATACTCAGAAGGAGGCCTCGTGCACTGCACTCCTAATGTCCTTACAAAGGCGGTAGAGGAAGTTAAGTGTTTGGGATTTAATCCTTTGTGTACAACATTTGGTGTTGCATTGATAGCTAAAACACTTTTGAGTAAGTCCCTCTGGGACGCCAAAGTTGATCTCTACAAGAGATGGGGATGGTCAGAAGAAACATTGTTAGAAGCATTTAGGAAGAACCCACACTGTATGTTAGCATCAAGGGATAAGATTAATGTGGTGATGAGTTTTCGGGTTAATCAGTTGGGTTGGAATTCTTTGCTTCTTGTCAAGGGTCCGAATATGTTTCTATACAGCTTTGAGAGAAGGATTATCCTGAGGGCTTCAGTTTTACGTTATCTTCAGTCAAAAGGTTTGATAAAAAAGAATGCTAGCTTAGTTGTGCCATTTGGTTTGACTAAAAGGCAGTTCCTGAAAAGATTTGTGGAATGTTTTGAGGAGCATAATCATTGTCTATTGAAGCTATATGAAAAGAAATTGAAGAATGATGGAATGCCAAGTGCTTGA 573 0.3927 MECQGQALLLYSEGGLVHCTPNVLTKAVEEVKCLGFNPLCTTFGVALIAKTLLSKSLWDAKVDLYKRWGWSEETLLEAFRKNPHCMLASRDKINVVMSFRVNQLGWNSLLLVKGPNMFLYSFERRIILRASVLRYLQSKGLIKKNASLVVPFGLTKRQFLKRFVECFEEHNHCLLKLYEKKLKNDGMPSA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00947 190 PANTHER CGI-12 PROTEIN-RELATED 18 166 IPR003690 GO:0003690|GO:0006355
Accr6g00947 190 Pfam mTERF 56 159 IPR003690 GO:0003690|GO:0006355
Accr6g00947 190 Gene3D Transcription termination factor 3, mitochondrial 7 176 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00947 Accr-Chr6 21123210 21123782 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr6g00947 mTERF 5.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00947 K15031 - tpra:123886552 179.104