Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00946 ATGGATCCCTGCATCAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCGCATGATAAGGAAGTGAGGAATACTTTCAGAAGGTTCATGGCATCAAACCTTGAAAAATGGGATTGGCATACAGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGCTAAGCAGGCTGAAAAAGATGCCAAGAAAAAAGCCAGAGCAAAAGAATTAAAAAAATTACGTAAAGCAAAAGAAAAAAAGGCCCAGGCTGAAGCTGCTAAGAATGCTTCGAAAACTGTGGAAAACCAAGTGAATGCTTCAACATCTTATCAGAAAGGACAATCTCAACCCAACAGTGGGTTGAAATTATCTAAAGAGGAGGCATTGAGAAGAGCTCAGGCTGAAGAAAGAGAGAAGAGAGCGGCAGCTGCAGAGAGAAGGCTTGCTGCCCTTAAGATTCAAGGTGGCGGTGCGACCACCATCCCAGGCACTTCAGAAGCAAAAAGTGCCGTCCCGGGCACTTCAGAAGCAAAAAGTGGAGCAGCCGGCGATATATATTGTTCCTGTTGTAATACCTCACTTGCCGGTAAAGTTCCATTCCACAGGTATAATTATAAATACTGCAGCACTTCATGCATGCATGTCCACAGGGAGATCTTAGAGGATGGTTGA 663 0.4404 MDPCIKDERGRTPYMLAHDKEVRNTFRRFMASNLEKWDWHTAKVPSALTKEMEESQAAKQAEKDAKKKARAKELKKLRKAKEKKAQAEAAKNASKTVENQVNASTSYQKGQSQPNSGLKLSKEEALRRAQAEEREKRAAAAERRLAALKIQGGGATTIPGTSEAKSAVPGTSEAKSGAAGDIYCSCCNTSLAGKVPFHRYNYKYCSTSCMHVHREILEDG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00946 220 MobiDBLite consensus disorder prediction 76 137 - -
Accr6g00946 220 Coils Coil 115 151 - -
Accr6g00946 220 Coils Coil 52 100 - -
Accr6g00946 220 MobiDBLite consensus disorder prediction 92 119 - -
Accr6g00946 220 Pfam Vms1-associating treble clef domain 183 215 IPR041540 -
Accr6g00946 220 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 1 219 IPR047139 -
Accr6g00946 220 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00946 Accr-Chr6 20977189 20980766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00946 1 157 C2H2 Transcription Factor Family AT1G01930 65.605 1.80e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00946 K26089 - gmx:100527709 238.81