Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00945 ATGGCGGCGGACGATCTTCCTGCTCAGAGTGTAGCTGGGTCGACGGCGGCAAATTCCTCGGAGAAGCGACACCGTTCCATATTCGAACTCCCGCCCGACTTTTTTCACTCCTGCCGCCTCCTTGCTTCTCCTCAATCGTCCGCTTCCGACAACCTTCAGAATTGCAATGACTCAGTCCAAGAAACCCTTGACCTTATTGAGAACGACGCTAATGGATCCCAAGACATCGTTGTTTCAATGCCCAGGTGGACTTGCAATACTTGCAAGGATCAATTTGAGTCCCTTCAATACCAGCGTTTGCATTTCAAGTCGGATATTCATCGGTTCAATGTGAAGTTGACAATGGCTGGAAAGAATATTGTTAAGGAAGAAGATTTTGAGCTGTTGACATCTGATTCTATTAGAGACTATGATGTTTCGAGTATATCAGGATCAGACGAAGATGATGATGATAACAAAATTGAAACTCAGAGACAAAATGTTCGTAACAAATCAAGTGAAAGTTTTAGGCAAAAGTTATTTATCTGCCTTTCGACAGGGGAGAGAGTCTCTGTTTGGAAGTGCTTAATAATGAATATGAGTGAGAATGTACTGAATGAGAATGAAGTGATCGAGAGGTTGAAGTCTTTGACTCTTGAGCCCAGGAATAATTCTCGCATGAGAATTGTGCTGCTTGCATCTGGTGGGCACTTTGCAGGTTGTGTGTTTGATGGTGATGAGCTTGTGGCTCACAAGACATTCCACAGATATGTTGTGAGGGCCAAGGCAGGGAAAAAACAGTCATCAAAAGATGCTACAGGTAGAGCTGCCCATTCTGCTGGGGCTTCACTCCGTCGCCACAATGAACTTGCATTAAAGAAGGAAATTCAAGAGCTGCTTACTGGTTGGCGAAATTATTTTGATGCTTCGAATTGTATATTTCTACATGCTCCCTCAAGTAGTCGTCAACTGCTCTTTGATGGAGAGAAACCATATTTTAGCAATCATCGTAATGTTATTAGAAACATTCCATTGACTGTTCGAAGGCCTACTTTAAGAGAAGCAAAACGTGTATATAACCAGTTGACTCAAGTATCCTACGAAGCAGAAGAGGATTTAGGGTCAACACCCATTACTGTAAGAAATGCTGACCCAGTCATTGGTAAAGAGGCCTTTACAAACTTAGATAGCAAGGATAAAAGTGAGGCTTGTTCGAGTAAACAAGATAATATTGAACTCCTTATTTCAAGTGCTAGTGAGAGTGAAGATGGGATAGTAGGTAAATCAACTCCTTTACATCAAGCCTCACAATCTGGTGACTCTCACAAGGTTTTAGAGTTACTGGAACAGGGCATGGATCCCTGCATCAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCGCATGATAAGGAAGTGAGGAATACTTTCAGAAGGTTCATGGCATCAAACCTTGAAAAATGGGATTGGCATACAGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGCTAAGCAGGCTGAAAAAGATGCCAAGAAAAAAGCCAGAGCAAAAGAATTAAAAAAATTACGTAAAGCAAAAGAAAAAAAGGCCCAGGCTGAAGCTGCTAAGAATGCTTCGAAAACTGTGGAAAACCAAGTGAATGCTTCAACATCTTATCAGAAAGGACAATCTCAACCCAACAGTGGGTTGAAATTATCTAAAGAGGAGGCATTGAGAAGAGCTCAGGCTGAAGAAAGAGAGAAGAGAGCGGCAGCTGCAGAGAGAAGGCTTGCTGCCCTTAAGATTCAAGGTGGCGGTGCGACCACCATCCCAGGCACTTCAGAAGCAAAAAGTGCCGTCCCGGGCACTTCAGAAGCAAAAAGTGGAGCAGCCGGCGATATATATTGTTCCTGTTGTAATACCTCACTTGCCGGTAAAGTTCCATTCCACAGGTATAATTATAAATACTGCAGCACTTCATGCATGCATGTCCACAGGGAGATCTTAGAGGATGGTTGA 1995 0.4301 MAADDLPAQSVAGSTAANSSEKRHRSIFELPPDFFHSCRLLASPQSSASDNLQNCNDSVQETLDLIENDANGSQDIVVSMPRWTCNTCKDQFESLQYQRLHFKSDIHRFNVKLTMAGKNIVKEEDFELLTSDSIRDYDVSSISGSDEDDDDNKIETQRQNVRNKSSESFRQKLFICLSTGERVSVWKCLIMNMSENVLNENEVIERLKSLTLEPRNNSRMRIVLLASGGHFAGCVFDGDELVAHKTFHRYVVRAKAGKKQSSKDATGRAAHSAGASLRRHNELALKKEIQELLTGWRNYFDASNCIFLHAPSSSRQLLFDGEKPYFSNHRNVIRNIPLTVRRPTLREAKRVYNQLTQVSYEAEEDLGSTPITVRNADPVIGKEAFTNLDSKDKSEACSSKQDNIELLISSASESEDGIVGKSTPLHQASQSGDSHKVLELLEQGMDPCIKDERGRTPYMLAHDKEVRNTFRRFMASNLEKWDWHTAKVPSALTKEMEESQAAKQAEKDAKKKARAKELKKLRKAKEKKAQAEAAKNASKTVENQVNASTSYQKGQSQPNSGLKLSKEEALRRAQAEEREKRAAAAERRLAALKIQGGGATTIPGTSEAKSAVPGTSEAKSGAAGDIYCSCCNTSLAGKVPFHRYNYKYCSTSCMHVHREILEDG 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00945 664 Coils Coil 496 544 - -
Accr6g00945 664 MobiDBLite consensus disorder prediction 536 563 - -
Accr6g00945 664 Coils Coil 559 595 - -
Accr6g00945 664 MobiDBLite consensus disorder prediction 520 581 - -
Accr6g00945 664 SUPERFAMILY Ankyrin repeat 402 473 IPR036770 -
Accr6g00945 664 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 17 663 IPR047139 -
Accr6g00945 664 ProSitePatterns Zinc finger C2H2 type domain signature. 85 107 IPR013087 -
Accr6g00945 664 Pfam Bacteroidetes VLRF1 release factor 222 360 IPR041175 -
Accr6g00945 664 Gene3D - 385 485 IPR036770 -
Accr6g00945 664 MobiDBLite consensus disorder prediction 140 162 - -
Accr6g00945 664 MobiDBLite consensus disorder prediction 1 23 - -
Accr6g00945 664 ProSiteProfiles Ankyrin repeat profile. 420 452 IPR002110 GO:0005515
Accr6g00945 664 MobiDBLite consensus disorder prediction 565 581 - -
Accr6g00945 664 Pfam Vms1-associating treble clef domain 627 659 IPR041540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00945 Accr-Chr6 20943424 20952203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00945 17 601 C2H2 Transcription Factor Family AT1G01930 54.395 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00945 K26089 - gmx:100527709 775.393