Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00910 ATGGTGAGAAGGAAGATAGAGATGAAGCGTATAGAGAACAAAACAAACAGGCAATTGACATTCTCAAAGAGGCGTAATGGACTCTTGAAGAAGGCTTTTGAGCTCTCAGTTCTGTGTGATGTTGAGGTTGCCCTCATCATCTACTCTGCCAAAGGCAAACTCTCTGAATTTTCAAGCTCCAGCTTGAAGGAGACAATTGACCGTTACCAAACATATGTTAAAGATACTCATGTCTTCGAACAAAATATGCAGCATCTGAATCAAGAAACAGCAAGTATGAAGAAGAAGATTGAGTTTCTTGAAGCTTCAAAACGGAAATTTACAGGAGAAGGTTTGAACACATATTCCCAACAAGAACTGGAAGAGATTGAACGAGAGGTGCTAAAGAGTGTCAGAAACGTTCGAGCAAGAAAGAATCAAATCATTAAGGAGCAAATGGAGAAACTAGAAGAGAAGGAAAAAACCCTAACAGAAGAATATGCATGGCTCTCTGAGAAGTGTGGTGTGGAGGCAAATCAAAGAAGACAGAACCAGAGTGAAAATATTTCATATTCAGATGTGGATACTGGCTTGTTCATCGGACTTCCAGAAACAGGATCACGAAATAAATTATGA 615 0.3935 MVRRKIEMKRIENKTNRQLTFSKRRNGLLKKAFELSVLCDVEVALIIYSAKGKLSEFSSSSLKETIDRYQTYVKDTHVFEQNMQHLNQETASMKKKIEFLEASKRKFTGEGLNTYSQQELEEIEREVLKSVRNVRARKNQIIKEQMEKLEEKEKTLTEEYAWLSEKCGVEANQRRQNQSENISYSDVDTGLFIGLPETGSRNKL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00910 204 Coils Coil 135 166 - -
Accr6g00910 204 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Accr6g00910 204 Pfam K-box region 81 167 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr6g00910 204 Gene3D - 13 98 IPR036879 GO:0003677|GO:0046983
Accr6g00910 204 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Accr6g00910 204 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Accr6g00910 204 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Accr6g00910 204 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 168 - -
Accr6g00910 204 FunFam MADS-box transcription factor MADS-MC 13 85 - -
Accr6g00910 204 Coils Coil 83 103 - -
Accr6g00910 204 ProSiteProfiles K-box domain profile. 83 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr6g00910 204 SUPERFAMILY SRF-like 3 76 IPR036879 GO:0003677|GO:0046983
Accr6g00910 204 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Accr6g00910 204 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Accr6g00910 204 CDD MADS_MEF2_like 3 72 IPR033896 GO:0000977|GO:0045944
Accr6g00910 204 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00910 Accr-Chr6 19861348 19866544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00910 1 154 MADS-box Gene Family AT2G45660 63.291 2.38e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Accr6g00910 K-box 4.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00910 - - zju:107432650 207.994