Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00903 ATGGATAATTATGGGTCTTCATCACCACACCGTTATCCAAGCCCGTATGGATATTATGGTAATCCTCCTCCATCTCATCCACCCCCGGCTTCAGATCCAATGCCACCTCCTCCTTACCCTTATGCATTCAATCATTCACATTCCTCCAACTATTCCTACCCCCCACCTCCGCCACCATTTGGTCATAGCCATTACCCTCCGCCACCGGACTATAGCCACCCCCCTCCACCGCCGGATTATAGCCATAACAGTCTACCACCTGACTTCAATTATCCCCCTCCACAGCCGTATTCTGCTCCTCAGCCTTATCCTCATCCATACACCATTCCTCCTGGGGTTGATAACACTCCTCATAGTTTTCAGTATGGATCATCTCATTATCCTCCCCAGCAAACCGAGGCAGGTCCATATCCCCAAAGTCAACCTCTTTCCCATTCACGTGCAAATAGTTTTTCTGATTCCCCCCAGCATGAGAGAATGAGCTCTGCTGGGGGTATGTCATTGCAAACTAGTCATAGTTTCAGTCCTTGTCGGACTTCTGCATACCCACCTTTGGATGATCTTATGGACAAAGTTAGCTTGTCTGATAACCAGCCAACCGCTCCTGCATCGCCCCCTGCACCGGTAGGGCAGCAACTGGCACATCCCATTTCAGTTCCACACCAAGATGGGAGGGAGGAATTTTACGATTATCCTAATAACTCCTTCTCTGGGTCAGGAACTTCCTACTCTGGTCGGATCAATTCATCTAGACTTTCATCTTATTCAGGTTCATTTAATGATTCAGTTCATAGTCCGAGTTTGCAGATTGTTCCATCACCGAATAAAGGATCATTGAAAGTTTTGCTTCTACATGGAAATCTAGATATATGTGTTCACGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACTTTAGGGGATGTGGTTGGTAAATTACCTGGAAATATGGGTATGAATAAGATTACTAGTGATCCTTATGTTACAATTTCAGTATCCAATGCTGTAATTGCAAGGACTTTTGTGATTAGCAACAGCGAGAATCCTGTTTGGACTCAACATTTTCATGTTCCCGTTGCACATAATGCTGCTGAAGTGCACTTTGCTGTTAAAGACAACGATGTAGTAGGTTCACAGCTCATGGGCATTGCATCAATTCCTGTGGAACAAATATACTCAGGAGAAAGAATAGAAGGGACCTATCCTGTGCTGAATAATAATGGGAAGCCTTGTAAGCCAGGTGCTGTATTGAGCTTGTCCATTCAGTACATCCCAATGGAGAGACTGAGCATTTATCACCAAGGAGTTGGAGCTGGCCCAGAATACACTGGAGTTCCTGGCACTTATTTTCCTCTGAGGAAAGGTGGAACTGTTACTCTATATCAAGACGCCCATGTTCCGGATGGCTGCCTCCCTAATGTGATGCTTGACCAAGGGATGTATTATGCACATGGAAAATGTTGGCATGACATCTTCGATGCCATTCGTCAAGCTCGGCGTTTGATTTATATTACAGGGTGGTCAGTTTGGCACAAAGTTCAGTTGGTAAGGGATGTTGGTAATCCATCAGGATACGCACTGGGTGACCTTCTAAGGTCCAAGTCACAGGAAGGAGTCAGAGTGCTTCTCCTTATTTGGGATGATCCTACGTCAAGGAGCATTTTAGGTTATAAAACAGATGGTGTCATGGCAACTCACGATGAAGAAACTCGACGATTTTTCAAAAACTCTTCTGTTAAAGTGCTGCTTTGTCCACGCATTGCAGGAAAACGACATAGCTGGGTGAAGCAAAGGGAAACCAGTACTATATATACGCATCATCAGAAAACTGTAATTGTTGATGCTGATTCTGGAAATAATAGAAGAAAAATTATAGCATTTGTTGGCGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTATTTTTAGGACACTCCAGACACTACACAAGGATGACTATCATAACCCTACTTTCACAGGTAATGTTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAGAATTGATGGTCCAGCAGCATATGATGTTCTGACCAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCATGGGATGAAAAAGTTGAGAAGTTCATATGATGATTCTTTGCTTAGGCTGAATAGAATCCCGGACATTATTGGCATGTCTGATGCTCTTAGTGCTAATGATAATGACCCTGAAGGTTGGCATGTTCAGATATTTAGATCGATTGATTCAAATTCTGTAAAGGGGTTTCCAAAGGATCCAAAAGATGCAACAAGCCAGAACTTAGTTTGTGGGAAGAATGTGTTGATTGACATGAGCATACATACAGCCTATGTGAAGGCCATCCGTGCTGCGCAGCACTACATATATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAGAGACCTTGGTGCTAATAATTTGATTCCAATGGAAATTGCCCTCAAGATTGCTGAAAAGATCAGGGCCAATGAGCGATTTGCTGTGTATATTGTTATTCCGATGTGGCCTGAGGGTGTTCCAACTGGGGCTGCCACGCAAAGGATTCTATTTTGGCAGTGTAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTAGAAGAGGCTTTCTCACCAGAAGACTACTTGAACTTTTTCTGTCTTGGCAATCGGGAGGTCAATGATACATATGGTAATAATGCAAAGCCTGGAGACCCTCCTCAAGCAAATAGTCCACAGGCACTAAGTCAAAGTAGCCGACGCTTTATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAGTATGTGATATTGGGATCTGCAAACATCAACCAACGCTCGATGGAAGGAACAAGGGATAGTGAGATTGCAATGGGAGCTTACCAACCTCATTATACATGGGCAAGAAGACATTCTTTTCCACGTGGACAGATCCATGGATATAGGATGTCACTGTGGGCAGAACACACGGCAACAATTGAAAACTGCTTCTTGCAACCGGAGAGCCTTGAATGCGTTAGAAGAGTAAGAGCGATGGGTGACATGAACTGGAAACAATTTGCGGCACCTGAAGTAACAGAGATGAAGGGGCACCTACTTAAATACCCAGTAGAAGTTGATCGAAAGGGAAAGGTTAGATCCCTCCCTGGCCATGAAAATTTCCCTGATGTTGGAGGCAAAATAACAGGGTCATTCCTTGCCATTCAGGAGAATCTTACCATTTAA 3282 0.4369 MDNYGSSSPHRYPSPYGYYGNPPPSHPPPASDPMPPPPYPYAFNHSHSSNYSYPPPPPPFGHSHYPPPPDYSHPPPPPDYSHNSLPPDFNYPPPQPYSAPQPYPHPYTIPPGVDNTPHSFQYGSSHYPPQQTEAGPYPQSQPLSHSRANSFSDSPQHERMSSAGGMSLQTSHSFSPCRTSAYPPLDDLMDKVSLSDNQPTAPASPPAPVGQQLAHPISVPHQDGREEFYDYPNNSFSGSGTSYSGRINSSRLSSYSGSFNDSVHSPSLQIVPSPNKGSLKVLLLHGNLDICVHEAKNLPNMDMFHKTLGDVVGKLPGNMGMNKITSDPYVTISVSNAVIARTFVISNSENPVWTQHFHVPVAHNAAEVHFAVKDNDVVGSQLMGIASIPVEQIYSGERIEGTYPVLNNNGKPCKPGAVLSLSIQYIPMERLSIYHQGVGAGPEYTGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVMLDQGMYYAHGKCWHDIFDAIRQARRLIYITGWSVWHKVQLVRDVGNPSGYALGDLLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKNSSVKVLLCPRIAGKRHSWVKQRETSTIYTHHQKTVIVDADSGNNRRKIIAFVGGLDLCDGRYDTPHHPIFRTLQTLHKDDYHNPTFTGNVGGCPREPWHDLHSRIDGPAAYDVLTNFEERWLKASKPHGMKKLRSSYDDSLLRLNRIPDIIGMSDALSANDNDPEGWHVQIFRSIDSNSVKGFPKDPKDATSQNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHRDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQCKTMQMMYETIYKALVEAGLEEAFSPEDYLNFFCLGNREVNDTYGNNAKPGDPPQANSPQALSQSSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARRHSFPRGQIHGYRMSLWAEHTATIENCFLQPESLECVRRVRAMGDMNWKQFAAPEVTEMKGHLLKYPVEVDRKGKVRSLPGHENFPDVGGKITGSFLAIQENLTI 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00903 1093 Gene3D Endonuclease Chain A 733 992 - -
Accr6g00903 1093 Pfam Phospholipase D Active site motif 605 639 IPR001736 GO:0003824
Accr6g00903 1093 Gene3D C2 domain 281 413 IPR035892 -
Accr6g00903 1093 Pfam PLD-like domain 790 975 IPR025202 -
Accr6g00903 1093 Gene3D Endonuclease Chain A 479 719 - -
Accr6g00903 1093 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 939 966 IPR001736 GO:0003824
Accr6g00903 1093 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 279 428 IPR035892 -
Accr6g00903 1093 ProSiteProfiles C2 domain profile. 264 403 IPR000008 -
Accr6g00903 1093 SUPERFAMILY Phospholipase D/nuclease 768 1025 - -
Accr6g00903 1093 SMART pld_4 939 966 IPR001736 GO:0003824
Accr6g00903 1093 SMART pld_4 604 639 IPR001736 GO:0003824
Accr6g00903 1093 MobiDBLite consensus disorder prediction 1 211 - -
Accr6g00903 1093 SMART C2_3c 287 402 IPR000008 -
Accr6g00903 1093 Pfam C2 domain 286 405 IPR000008 -
Accr6g00903 1093 SUPERFAMILY Phospholipase D/nuclease 449 703 - -
Accr6g00903 1093 PANTHER PHOSPHOLIPASE D 276 1084 IPR015679 -
Accr6g00903 1093 MobiDBLite consensus disorder prediction 114 178 - -
Accr6g00903 1093 FunFam Phospholipase D 752 985 - -
Accr6g00903 1093 FunFam Phospholipase D delta 480 718 - -
Accr6g00903 1093 Pfam Phospholipase D C terminal 1013 1083 IPR024632 -
Accr6g00903 1093 CDD C2_plant_PLD 280 426 - -
Accr6g00903 1093 MobiDBLite consensus disorder prediction 51 111 - -
Accr6g00903 1093 MobiDBLite consensus disorder prediction 16 42 - -
Accr6g00903 1093 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 639 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00903 Accr-Chr6 19675050 19685644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00903 68 1093 Phospholipase D Gene Family (Wang group) AT2G42010 69.209 0.0 1457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00903 K01115 - gmx:100791059 1628.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00903 6 19675050 19685644 Accr6g00903 6 19675050 19685644 ECH