Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00887 ATGGCTGCTTCTTCTTCCCAGGTCCCATGTGGAAAATATGATGTTTTCATCAGCTTCAGGGGTACAGACGTCAGATTTGGTTTTCTCAGCCATTTGGAAAGGGAGTTGCGTCGAAAGAACATAGATGTCTATGTGGATGACAGGCTCCAGAGAGGAGAAGAAATATCATCATCACTTGTGAAAGCAATAGAAGGATCCAGGATTGCTTTGGTTATATTCTCAAAAGATTATGCTTCCTCAAGGTGGTGCTTGGAAGAGCTTGTCAAAATCATGAAGTGTAAGGAAGTTAGTAAACAGATTGTGATACCAGTTTTTTATCTCATAGATCCATCAGACGTCAGACATCAAAAACGCACTTATGCAGAGGCATTCACTCTTCATGAAGAGAAGTCCAAGGTTAGCATGGACAATGTGCAAATTTGGAGATCCGTTTTAAAAAAATCTGCCAAATTATCTGGTCATCATTCATCAGCATTTCGAAACGAATCCCAACTCATTGATGCAATAGTTGAAGATGTCTTGAAAAAATTGGAAGATAATAGCCCAATTATGCCACAATCTCATCTCATTGGATTTCATCAAAATTTCACTGGTGTTGAATCATTAATGGAAATTGAGTTACAGGAAGTTCGTATTCTTGGGATTTGGGGTATGGGAGGGATAGGCAAAACAACCCTTGCTCATGCTATATTTGACAAATTCTTGTCTAAATTTGGAAGTCACTGCTTCTTAGAAAATGTGAGAGAAAAAGCAACAAAGATTGGTGGTTTGAATTCTTTGCATCAAGAGCTTATATCTAAGTTATTAAACACAAAAGATCACATAGATATTGAAGACGCAAAGAGAAGGCTGCAAGGGAAACAAGTCTTAATTGTGCTTGATGACGTGGACAATCCAAAGCAATTAAAAGATTTGGTTCGACTTTTCCAATTGGGACCAGGCAGCAGGGTCATTGTAACAAGTAGGGACAGTCATGTTCTTAGGAGTGGAGGTATTGAAGATCAATTCATACATGAAGTCATTGAATTGAGTTTAGAACAATCACTTGAACTCTTTAGCATGCATGCCTTCAATCAGAGTCATCCTAAAATAGGATATGAAGAGCTATCACAAAAGACAGTGGCCATTGCTACAGGAATTCCTTTAGCTTTAGAAGTTTTGGGTTCCCATTTTCATTCTAGAGATAAAGCATATTGGGAAAGTGAGCTTAGCAAACTCGAGATGTATCCCCGTAAGCAAATTCGAGATATATTGGAGATAAGTTATCATGGATTGGATCCTACGGACAAGGAAATATTTTTAGACATTGCATTTTTTTGGCTAACTTTCAAAAAGGATGAAGTTACTTATTACCTAGAGGCTTTTGGTTTTGAAGCGGTTAGTGGAATACAAAATCTTATAGATAAAGCTCTCATAAAGTTAGGTGGTTGGGATGAATATATTTTAATGCATGATTTGATACGAGAAATGGCTGAGCAAATAGTTCATGGAGAAAGTAAGAGGCATCTTAAAAGATGTAGCCGATTAAAGGATGCAAAGGAAATCTATAATGCATTGACAAGTAAAACGGAAATGGATGAAATTGAAGGCATTGGATTGGATTTGAGGAAAATACAAAATGTACAAGTGGAAGCTGACATTTTTTTAAGGATGAAAAATTTAAGATTCCTCACATTTTATGATGATGATTATGATTATGATTCTGATGATGATGATTCTTCAGATAGCATTAGTCAACATATAGATCCTCATTCTGGTCTTGAAAATTTTCCTGATAAATTGAGGTATCTTCGTTGGGATCATTATCCATTGAATACTCTGCCATCAGGATTTTATCTTAAAAATCTTGTTGAACTTTACATTCCAAACAGCCATGTTAAAAGGCTTTGGGATGGAAAACAGGATCTTGGAAACCTAAGGAAAATGAATTTGAGTTGGTCCAAACAATTGATAGAGTTGCCTGATCTCTCGATGGCACACAAGCTTGAAAGTGTAGATCTCACGGAATGTCGAAGTTTGAGGAGTGTTCATCCATCTATTTTGTCTCTCCCCAATATTATTGTAATGAGTGTAGATGGTTGCTTTCAATTAGAGAGTATTGAAAGTGAGACTCATTTAGAATGTTTCTTTTTCAATCATGACTTGGACGATGAAGACTTTCTGGAGGATAGGAAATTTTGTTTGTCATCAAACAAATTGAGTCGTTTATGTCTTGAAGAAACTGAAGTCGAAATATTTCATTTCCCAATCCGTCGTTTCCGAGAACTTAAACGAATTAGAATTTGTGATGGTCTAGAAGGGAGTGTTTCAATAGATGAGCTGTGTTGCTTGAGAAATCTTGAGGTGTTTGAGGTTACCAATTTGAAGCAAGTAATTGACACAAAGCTGCTACACTCCCTTTTTGATGCTTGGCGTGATTTAAGAATACTAAGTTTGGAGGGGTGTAGTGACTTGTCGGAAATCCCTGATAATATCAAGACCTTGACAAGGTTAGAATATTTGTCATTGAATGACTCTGCTGTGGAGACATTGCCAATCTGCGTCAGCCATCTTTCAAGTTTAACAAAAATTTCCCTGAGAAGGTGCAAAAGGCTTAAGTCGATACTTGGACTTCCTCCCTTCCTTGGAGAGTTAGACGCCTCTGAATGCACATTATTGGAGACTGTATCCTCTGACTCTCTAGTTCGGTTCCCATGTGTCTTCAACTTGTGTAACTGTGAAAAATTGGATCAGCGTTCACTTCGCTGTAATCAGGAATTACTTTCCTCAATGAATTCGCATGATTTTTTTTATGGTTTAATTTGTTACCCAGGAAGTAGAGTTCCAGAGTGGATGGAATATAAACCTATGACTGAGGCTTTCAATGCAACCGAATTTACTTGTAATCTTGAACGATCACAGCATTTATTAATTTGTTGTGTTGCTCCTTCTCATCTCGTCTCACAGCAATTAAAAGAAGTGCATTGTTATTTCTCTTATGATGATAACAACAAATTTCATCGTTCACACAAGATATCTTATCCTGCATTGAATCGGGATCATGTGTTGCTATGGCCTGAGACGACAAGCCTCTCAGCTAGGATAGGTAATGATGCTAAGATTTCATGTGAATTCTTTCTGGAATATTGGGATGAAGTGGAGAGAGCCTCTTACAAAGTCCCTGCAAAAGCATGTGGAATACACCTACTCCATTACTCGCAGTCCGGTCAAAGTAGGAAGAGGGTTGCAGATATTAGGGTTGAAGATCAACTGCCTTTCACAAAGCAACTCTAG 3273 0.3758 MAASSSQVPCGKYDVFISFRGTDVRFGFLSHLERELRRKNIDVYVDDRLQRGEEISSSLVKAIEGSRIALVIFSKDYASSRWCLEELVKIMKCKEVSKQIVIPVFYLIDPSDVRHQKRTYAEAFTLHEEKSKVSMDNVQIWRSVLKKSAKLSGHHSSAFRNESQLIDAIVEDVLKKLEDNSPIMPQSHLIGFHQNFTGVESLMEIELQEVRILGIWGMGGIGKTTLAHAIFDKFLSKFGSHCFLENVREKATKIGGLNSLHQELISKLLNTKDHIDIEDAKRRLQGKQVLIVLDDVDNPKQLKDLVRLFQLGPGSRVIVTSRDSHVLRSGGIEDQFIHEVIELSLEQSLELFSMHAFNQSHPKIGYEELSQKTVAIATGIPLALEVLGSHFHSRDKAYWESELSKLEMYPRKQIRDILEISYHGLDPTDKEIFLDIAFFWLTFKKDEVTYYLEAFGFEAVSGIQNLIDKALIKLGGWDEYILMHDLIREMAEQIVHGESKRHLKRCSRLKDAKEIYNALTSKTEMDEIEGIGLDLRKIQNVQVEADIFLRMKNLRFLTFYDDDYDYDSDDDDSSDSISQHIDPHSGLENFPDKLRYLRWDHYPLNTLPSGFYLKNLVELYIPNSHVKRLWDGKQDLGNLRKMNLSWSKQLIELPDLSMAHKLESVDLTECRSLRSVHPSILSLPNIIVMSVDGCFQLESIESETHLECFFFNHDLDDEDFLEDRKFCLSSNKLSRLCLEETEVEIFHFPIRRFRELKRIRICDGLEGSVSIDELCCLRNLEVFEVTNLKQVIDTKLLHSLFDAWRDLRILSLEGCSDLSEIPDNIKTLTRLEYLSLNDSAVETLPICVSHLSSLTKISLRRCKRLKSILGLPPFLGELDASECTLLETVSSDSLVRFPCVFNLCNCEKLDQRSLRCNQELLSSMNSHDFFYGLICYPGSRVPEWMEYKPMTEAFNATEFTCNLERSQHLLICCVAPSHLVSQQLKEVHCYFSYDDNNKFHRSHKISYPALNRDHVLLWPETTSLSARIGNDAKISCEFFLEYWDEVERASYKVPAKACGIHLLHYSQSGQSRKRVADIRVEDQLPFTKQL 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00887 1090 Gene3D - 342 426 IPR042197 -
Accr6g00887 1090 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 153 IPR035897 -
Accr6g00887 1090 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 179 - -
Accr6g00887 1090 PRINTS Disease resistance protein signature 212 227 - -
Accr6g00887 1090 PRINTS Disease resistance protein signature 849 865 - -
Accr6g00887 1090 PRINTS Disease resistance protein signature 283 297 - -
Accr6g00887 1090 PRINTS Disease resistance protein signature 377 391 - -
Accr6g00887 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 436 IPR027417 -
Accr6g00887 1090 Gene3D - 10 178 IPR035897 -
Accr6g00887 1090 Pfam TIR domain 12 183 IPR000157 GO:0007165
Accr6g00887 1090 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
Accr6g00887 1090 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 703 IPR044974 GO:0006952
Accr6g00887 1090 Gene3D Ribonuclease Inhibitor 500 710 IPR032675 -
Accr6g00887 1090 Gene3D Ribonuclease Inhibitor 712 929 IPR032675 -
Accr6g00887 1090 SUPERFAMILY L domain-like 483 907 - -
Accr6g00887 1090 SMART till_3 12 151 IPR000157 GO:0007165
Accr6g00887 1090 Gene3D - 179 336 IPR027417 -
Accr6g00887 1090 Pfam NB-ARC domain 201 418 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00887 Accr-Chr6 19061611 19065274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00887 13 893 WRKY Transcription Factor Family AT4G12020 29.933 3.45e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00887 - - pcin:129311144 818.15