Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00885 ATGGCTGCTTCTTCTTCCCAGGTCCCATGTGGAAAATATGATGTTTTCATCAGCTTCAGGGGTGCAGACGTCAGATTCGGTTTTCTGAGCCATTTGGAAAGGGAGTTGCATCGAAAGAACATAGATGTCTATGTGGATGACAGGCTCGAGAGAGGAGAAGAAATATCATCATCACTTGTGAATGCAATAGAAGGATCCAGGATTGCTTTGGTTATATTCTCAAAAGATTATGCTTCCTCAAGGTGGTGCTTGGAAGAGCTTGTCAAAATCATGAAGTGTAAGGAAGTTAGTCAACAGATTGTGATACCAGTTTTTTACCTCGTAGATCCATCAGACGTCAGGCATCAAAAAGGCGCTTATGCAGAGGCATTCACTCTTCATGATGAAGAGAAGCTCAAGGTTAGCGTGGACAATGTGCAAATTTGGAAATCCGTTTTAAAAAAATCTGCCAACTTATCTGGTCATCATTCATCAGCATTTCGAAACGAATCTCAACTCATTGATGCAATAGTTGAAGATGTCTTGAAAAAATTGGAAGATAATAGCCCAATTATGCCACAATCTCATCTCATTGGATTTCATCAAAATTTCACTCGTGTTGAATCATTAATGGAAATTGAGTTACAGGAAGTTCGTATTCTTGGGATTTGGGGCATGGGAGGGATAGGCAAAACAACCCTTGCTCATGCTATATTTGACAAATTCTTGTCTAAATTTGAAAGTCATTGCTTCTTAGATAATGTGAGAGAAAAAGCAACAAAGATTGGTGGTTTGAATTCTTTGCATCAAGAGCTTATTTCTAAGTTATTAAACATAAAAGATTACATAAATATGAAAGACGCAATGAGAAAGCTGCAAGGGAAAAAAGTCTTAATTGTGCTTGATGACGTGGATAATTCAAAGCAACTGAAAGATTTGGTTGGATGTCTCCAATTGGGACAAGGCAGCAGGGTCGTTGTAACAAGTAGGGACAGGCATGTTCTTAGGAGTGGAGGGATTGATGATCAATTCATACATGGAGTCAATGAATTGACTTCAAAAGAATCACTTGAACTCTTTAGCATGCATGCCTTCAATAAGAGTCATCCTAAAATAGGATATGAAGACCTATCACATAAGACAGTGGCCATTGCTACAGGAATTCCTTTAGCTTTAGAAGTTTTGGGTTCCTATTTTCATTCTAGAGATAAAGCATATTGGGAAAGTGAGCTTAGCAAACTTGAGATGTATCCCCGTAAGCAAATTCAAGATATATTGGAGATAAGTTATCATGGATTGGATCCTATGGACAAGGAAATATTTTTAGACATTGCATTTTTTTGGCGAACTTCCACAAAGGATGAAGTTACTTATTACCTAGAGGCTTGTGGTTTTAAAGCGGTTAGTGGAATACAAAATCTTACAGATAAAGCTCTCATAAAATTAGATTGGGAGGAACGTATTTTAATGCATGATTTGATACAAGAAATGGCTGAGCAAATAGTTCGTGGACAAAGTAAGAGACATCTTAAAAGATGTAGCCGATTAAAAGATAAAGATGAAATCTATGATGCGTTCACAAGTAAGACGGAAATGGATGAAATTGAAGGCATTCTGTTGGATGTGAGGAAAATGGAATATGTACAACTGGAAGCTGACATTTTTTTAAGGATGAAAAATTTAAGATTCCTCACATTTTATTATGATGATGATGATGATGATGATGGTGATGATGATTATGATGATGATGGTGATGATGATTATGATGATGATTTTTCAGAAAGCATTAGTCAATATATAGATCTTCATTCTGGTCTTGACAATTTTCCTAATAAATTGAGTTATCTTCGTTGGGATCATTATCCATTGAATTCTCTGCCATCAGGATTTTATCTTAAAAATCTTGTTGAACTTTACATTCCAAACAGCTGTGTTAAAAGGCTTTGGGATGGAAAACAGGATCTTGGAAACCTAAGGAAAATGAATTTGCATTGGTCCAAACAATTGATAGAGTTGCCTGACCTCTCGATGGCACACAAGCTTGAAAGTGTTGATCTCACGGAATGTCGAAGTTTGAGGAGTGTTCATCCATCTATTTTGTCTCTCCCCAATATTATTGTAATGAGTGTAGATGGTTGCTTTCAATTAGAGAGTATTGAAAGTGAGACTCATTTAGAATGTTTCTTTTTCGATTGTGACGACTTTATGAATGATGACTTTGAGGAGGATAGGAAATTTTGTTTGTCATCAAACAAATTGAGTCGTTTATGTCTTGAAGAAACTGAAGTCGAAATATTTCATTTCCCAATCCATCGTTTTCGAGAACTTAAACGTATTAGAATTTGTGGTGGTCTAGAAGGGAGTGTTTCAATAGATGAGCTGTGTTGCTTGAGAAATCTTGAGGTGTTTGAGGTTACCAATTTGAAGCAAGTAATTGACACAAAGCTGCTACACTCCCTTTTTGATACTTGGCGTGATTTAAGAATACTAAGTTTGGAGGGGTGTAGTGACTTGTCAGAAATCCCTGACAATATCAAGACCTTGACAATGTTAGAACATTTGTCATTGAATGACTCTGCTGTGGAGACATTGCCAACCTGCGTCAGCCATCTTTCAAGTTTAGAAGAAATTTTTCTGAGAAGGTGCAAAAGGCTTAAGTCGATACTTGGACTTCCTCCCTTCCTTGAAAAGTTAGATGCCTCCGAATGCACATTATTGGAGACTGTATCCTCCGACACTCTAGTTCTGACTAAATGTGCCTTCAACTTTTGTAACTGTGAAAAATTGGATGAGAGTTCACTTCGCTATATCCAGGAATTAATTCTTTCCTCAATGACTACAGATCGTTTTTATTGCCGTCGTTTAATTTGTTACCCAGGAAGTAGAGTTCCAGAGTGGATGGAATATAAACCTATGACAGAGCCTTTCAATGCAACCGAATTTACTTGCAATCTTGAACTAGCGCAGGGTTTATTAATTTGTTGTTGTTGTGTTGCTCCTCCTCATCCCGTTTCACAGCAATTAAAAGAAGTTCATTGTTATTTCTCTTATGATAACAACAAATCCCATACTTCACACGCGTTATCTTATCCTGCATTGAATTGGGATCATGTGTTGCTATGGCCTGTGGCGTGGCTCTCATTTGGGATAGGTAATGATGCTAAGATTTCATGTGAATTCTTTCTGGAATATTGGGATGAAGTGGAGAGAGCCTCTTACAAAGTCCCTGCAAAAGCATGTGGACTACACCTACACCATTACTCGGAGTCGGATTGGAGTAGGGTTAGTTGA 3270 0.3752 MAASSSQVPCGKYDVFISFRGADVRFGFLSHLERELHRKNIDVYVDDRLERGEEISSSLVNAIEGSRIALVIFSKDYASSRWCLEELVKIMKCKEVSQQIVIPVFYLVDPSDVRHQKGAYAEAFTLHDEEKLKVSVDNVQIWKSVLKKSANLSGHHSSAFRNESQLIDAIVEDVLKKLEDNSPIMPQSHLIGFHQNFTRVESLMEIELQEVRILGIWGMGGIGKTTLAHAIFDKFLSKFESHCFLDNVREKATKIGGLNSLHQELISKLLNIKDYINMKDAMRKLQGKKVLIVLDDVDNSKQLKDLVGCLQLGQGSRVVVTSRDRHVLRSGGIDDQFIHGVNELTSKESLELFSMHAFNKSHPKIGYEDLSHKTVAIATGIPLALEVLGSYFHSRDKAYWESELSKLEMYPRKQIQDILEISYHGLDPMDKEIFLDIAFFWRTSTKDEVTYYLEACGFKAVSGIQNLTDKALIKLDWEERILMHDLIQEMAEQIVRGQSKRHLKRCSRLKDKDEIYDAFTSKTEMDEIEGILLDVRKMEYVQLEADIFLRMKNLRFLTFYYDDDDDDDGDDDYDDDGDDDYDDDFSESISQYIDLHSGLDNFPNKLSYLRWDHYPLNSLPSGFYLKNLVELYIPNSCVKRLWDGKQDLGNLRKMNLHWSKQLIELPDLSMAHKLESVDLTECRSLRSVHPSILSLPNIIVMSVDGCFQLESIESETHLECFFFDCDDFMNDDFEEDRKFCLSSNKLSRLCLEETEVEIFHFPIHRFRELKRIRICGGLEGSVSIDELCCLRNLEVFEVTNLKQVIDTKLLHSLFDTWRDLRILSLEGCSDLSEIPDNIKTLTMLEHLSLNDSAVETLPTCVSHLSSLEEIFLRRCKRLKSILGLPPFLEKLDASECTLLETVSSDTLVLTKCAFNFCNCEKLDESSLRYIQELILSSMTTDRFYCRRLICYPGSRVPEWMEYKPMTEPFNATEFTCNLELAQGLLICCCCVAPPHPVSQQLKEVHCYFSYDNNKSHTSHALSYPALNWDHVLLWPVAWLSFGIGNDAKISCEFFLEYWDEVERASYKVPAKACGLHLHHYSESDWSRVS 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00885 1089 SMART till_3 12 152 IPR000157 GO:0007165
Accr6g00885 1089 Pfam TIR domain 12 184 IPR000157 GO:0007165
Accr6g00885 1089 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 437 IPR027417 -
Accr6g00885 1089 SUPERFAMILY L domain-like 483 925 - -
Accr6g00885 1089 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 715 IPR044974 GO:0006952
Accr6g00885 1089 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 180 - -
Accr6g00885 1089 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
Accr6g00885 1089 Gene3D - 180 335 IPR027417 -
Accr6g00885 1089 Pfam NB-ARC domain 202 415 IPR002182 GO:0043531
Accr6g00885 1089 PRINTS Disease resistance protein signature 213 228 - -
Accr6g00885 1089 PRINTS Disease resistance protein signature 378 392 - -
Accr6g00885 1089 PRINTS Disease resistance protein signature 669 685 - -
Accr6g00885 1089 PRINTS Disease resistance protein signature 284 298 - -
Accr6g00885 1089 Gene3D - 343 427 IPR042197 -
Accr6g00885 1089 Gene3D Ribonuclease Inhibitor 730 942 IPR032675 -
Accr6g00885 1089 Gene3D Ribonuclease Inhibitor 491 721 IPR032675 -
Accr6g00885 1089 ProSiteProfiles TIR domain profile. 11 178 IPR000157 GO:0007165
Accr6g00885 1089 Gene3D - 10 179 IPR035897 -
Accr6g00885 1089 SMART AAA_5 210 343 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00885 Accr-Chr6 18948090 18951745 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00885 13 915 WRKY Transcription Factor Family AT4G12020 29.762 5.84e-91 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00885 - - pcin:129311144 819.305