Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00867 ATGAGTTTTGGGGGTTTTCTCGAAAATAACTGGGGTGGTGGAGGAACTGGCGGAGGTGCCAGAATCGTCGCCGATATTATTCCTTACAGCAACGGCACCACCAACGATAATAGAATGCCGTCGAGTGGTTCAATCTCACATCAGCCTCGTCTGGTCACGACAGCATCCACCACCACCATGGCCAAATCCATGTTCAACTCTCCAGGACTTTCTCTCGCACTCCAAACGAATCTTGACGAGCAACAAGGGGATGTGAATAGAATGGGTGGAGATAGCTACGAGCCTGGGTTGAGAAGAAGTAGAGAAGAAGAACACGAAAGTAGATCTGGCAGTGATAACATGGAAGGCCCCACTTCCGGCGACGATCTGGACGCCGCCGACAAGCCTCCCCGGAAAAAACGCTATCACCGACATACCCCTCAGCAAATTCAAGAGCTCGAAGCTCTCTTCAAAGAGTGCCCACACCCAGATGAGAAACAAAGACTCGAACTTAGCCGAAGACTTAACCTGGAAACCAGACAAGTGAAATTTTGGTTCCAAAATCGAAGAACCCAGATGAAGACCCAATTGGAGCGCCATGAGAACTCTTTGCTGAGGCAATCGAACGATGAACTGAGAGCAGAGAATATGTCTATAAGAGAAGCCATGAGGAATCCGATATGTTCAAATTGTGGAGGGCCAGCGATTATAGGCGAGATTTCGGTCGAAGAACAACACTTGAGGATTGAAAACGCTCGATTAAAGGATGAGTTAGACCGAGTTTGTGCTCTCGCCGGAAAGTTTCTAGGCCGGCCCGTTTCTTCATTAACCGGTCCGATGGGTCCTTCATTGCCCAACTCAAGCTTAGAACTCGGAGTTGGCATCAACGGGTTTGGTGGTATCAGTACTGTCCCTTCAACATTGCCTTTAGGGCCCGCAGATTTCGGGATTTCCAGCCAATTAGCCATGGCCCCTCTGGCGGCAACAACGACTACGGCGATGACGAGACCACCGGGGAGTTTGGTCGACAACAGGTCGATAGAGAGGTCTATGTTTCTGGAGCTGGCTTTGGCGGCCATGGATGAGCTGGTGAAAATGGTTCATACAGATGAGCCTCTCTGGTTGAGAAGCTTAGAAGGAGGAGGAAGACAGATTCTGAATCATGAAGAGTATATGAGAACATTTACAAATCCTTGCATTGGAATGAGACCTAATGGCTTTGTCTCAGAAGCTTCTAGAGAAACTGGAATGGTTATCATCAACAGCTTGGCCCTTGTTGAGACCCTCATGGATTCCAATCGCTGGACAGAAATGTTTCCTTATATGATCGCCAGAACCTCCACCACCGAAGTCATCTCCGGCGGAATCAATGGAACCAGAAATGGTGCTCTCCAACTGATGCATGCGGAGCTACAGGTTCTATCGCCATTGGTGCCGGTTAGAGAGGTGAACTTTCTTAGATTCTGCAAGCAACACGCAGAGGGGGTATGGGCTGTGGTGGATGTATCGATAGATTCGATCATTCGAGAAGCTTCTGGAACTCCATCGTTTATGAACAACTGTGGTTGTCGGAGGCTTCCTTCTGGGTGCCTCGTTCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAACATGCAGAATACGATGAAAGCCAAGTCCACCAACTCTATAGACCCTTGTTGAGCTCCGGCATGGGTTACGGTGCTCAACGGTGGCTCGCCACCCTGCAACGCCAATGTGAATGCCTTGCCATCTTAATGTCCTCCTCTGTCCCCCCTCGAGATCACAGCGCTGCCATAACGGCCGGTGGGCGGCGGAGCATGTTGAAGCTAGCACAGCGAATGACCAACAATTTTTGTGCCGGAGTTTGCGCTTCCACTGTGCACAAGTGGAACAAGCTGAACGCCGGCAATGTAGGTGAGGATGTCAGGGTGATGACTCGGAAGAGCGTGGATGATCCCGGCGAGCCTCCGGGGATAGTTTTAAGTGCAGCCACCTCCGTTTGGCTTCCGGTTTCACCCCAGAGACTGTTCGATTTCCTACGTGATGAACAACTCAGAAGTGAATGGGACATACTCTCAAACGGTGGGCCCATGCAAGAGATGGCCCACATCGCCAAAGGCCAAGACCATGGCAATTGCGTCTCTCTCCTACGAGCCAGTGCGATGAATACAAACCAGAGTAGCATGCTAATACTGCAGGAGACGTGCATAGACGCGGCGGGGTCGCTTGTAGTGTACGCGCCGGTGGACATACCGGCCATGCATGTGGTTATGAACGGGGGCGACTCGGCTTACGTGGCGTTGTTGCCATCCGGGTTTGCTATAGTCCCAGATGGACCGGGGTCGCGTGGGTCCCAAACGCCGGTGAGCAATGGCGGCGTGAATGAGAAGGAGAGTGGGTCCCTCCTGACGGTGGCTTTTCAAATCCTCGTGAATAGCCTCCCTACAGCCAAGCTCACGGTGGAATCGGTGGAGACGGTGAACAACCTCATCTCGTGTACCGTTCAGAAAATAAAGGCCGCTGTTCACTGTGAAAGCTGA 2529 0.5132 MSFGGFLENNWGGGGTGGGARIVADIIPYSNGTTNDNRMPSSGSISHQPRLVTTASTTTMAKSMFNSPGLSLALQTNLDEQQGDVNRMGGDSYEPGLRRSREEEHESRSGSDNMEGPTSGDDLDAADKPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMKTQLERHENSLLRQSNDELRAENMSIREAMRNPICSNCGGPAIIGEISVEEQHLRIENARLKDELDRVCALAGKFLGRPVSSLTGPMGPSLPNSSLELGVGINGFGGISTVPSTLPLGPADFGISSQLAMAPLAATTTTAMTRPPGSLVDNRSIERSMFLELALAAMDELVKMVHTDEPLWLRSLEGGGRQILNHEEYMRTFTNPCIGMRPNGFVSEASRETGMVIINSLALVETLMDSNRWTEMFPYMIARTSTTEVISGGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIIREASGTPSFMNNCGCRRLPSGCLVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGYGAQRWLATLQRQCECLAILMSSSVPPRDHSAAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDEQLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNTNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQTPVSNGGVNEKESGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAVHCES 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00867 842 Pfam Homeodomain 132 187 IPR001356 GO:0003677
Accr6g00867 842 Coils Coil 198 218 - -
Accr6g00867 842 MobiDBLite consensus disorder prediction 94 111 - -
Accr6g00867 842 FunFam Homeobox-leucine zipper protein GLABRA 2 347 576 - -
Accr6g00867 842 SUPERFAMILY Homeodomain-like 116 189 IPR009057 -
Accr6g00867 842 CDD homeodomain 131 189 IPR001356 GO:0003677
Accr6g00867 842 Pfam START domain 347 577 IPR002913 GO:0008289
Accr6g00867 842 ProSiteProfiles 'Homeobox' domain profile. 129 189 IPR001356 GO:0003677
Accr6g00867 842 Gene3D - 119 204 - -
Accr6g00867 842 ProSiteProfiles START domain profile. 338 580 IPR002913 GO:0008289
Accr6g00867 842 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 128 839 IPR042160 -
Accr6g00867 842 CDD START_ArGLABRA2_like 342 576 - -
Accr6g00867 842 MobiDBLite consensus disorder prediction 80 139 - -
Accr6g00867 842 FunFam Homeobox-leucine zipper protein HDG1 119 205 - -
Accr6g00867 842 SUPERFAMILY Bet v1-like 606 835 - -
Accr6g00867 842 SMART HOX_1 130 193 IPR001356 GO:0003677
Accr6g00867 842 SUPERFAMILY Bet v1-like 340 577 - -
Accr6g00867 842 SMART START_1 347 577 IPR002913 GO:0008289
Accr6g00867 842 ProSitePatterns 'Homeobox' domain signature. 164 187 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00867 Accr-Chr6 17925853 17931824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00867 1 842 Homeobox Transcription Factor Family AT3G61150 64.527 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr6g00867 START 9.9e-53 CL0209