Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00836 ATGGGCGCGCTTGTGCGCGTTCCGGCAGCAACAACATCCGTTCTTGTCCCTCTTTTGCTTCTTCTTCTTCTCTGGTCGTCCACGCCTTCATTGTCCTACTCCGACGCGGAAGCCCTCTTGAAATTCAGAAGCTCCCTCAGCAATGTCGTTAGTCTCAGCAGCTGGGATCCCGCCATCAACCCTAAGCCGCCATGCAACGGCAATATCGCCAACTGGGTCGGCATTTTCTGCATCAACGGCAGCGTTTGGGGCTTCCGTCTCGAGAACATGGGCCTCATGGGAAACATTGACGTTGAAGCTCTTGCTTCCATGCCCCGTTTAAGGTCTATTAGCTTGATGAACAATTCCTTCGCCGGACCTCTGCCGGAGATCCAGCGCATGAAGAATCTGAAGTCCCTTTATTTATCATACAACCATTTCTCGGGTAGCATCCCCAACGAGGCATTTGTGGATATGAACATGTTAAAGAAAGTTTATCTGGCTAATAACCAATTCAACGGAGAAATTCCTTCCTCCCTGGGCGTCTTGCCTAGCCTCCTCGCCGTCCGGCTGGATGGCAACAAGTTTCACGGCCGAATCCCAAAGTTTCAAAATAGAACGTTGAAGCTTATTGATATGTCTAACAATGATTTGGAAGGCCCCATTCCTCCGAGTCTAGCATCTTTCAGCGCCTTCGCTTTCTCAGGGAACGCACATTTATGTGGACGTCCTTTGGAGAATCCATGCCGTTCAATCCCTTACGCGAACATAGATTCTCCATCAAAGACATCGATTCTCAGGATTCTTCTCATTCTAGTTCTCACAATACTTATCGTAGTGGTGATCGTTTCGGCGATCGTGATAGCCCGCCTGAGAAATCGCCAGAGAAACGCGGACGACGAATACCGGAGCCAACATTCCGTGAAGTACGCTCCTTCGGCGGCGTACTCGAAGCCGAAGACAATGGTCGATCGTGAGAATGCGAACTTTATTGCAGAAAAAAACAAGAATTATCAGAAAACGCGATCGATATCGAAGAAAGGAGAGGTTGGGAAGTTGATATTTTTGAGGAATCGGGAGAAGAAGTTTGATTTGCAGGATTTGATGAAGGCGTCGGCGGAGGTTCTAGGGAGTGCGGCATTTGGATCGTCGTATAAGACGTCGTTGAAGGGTGATCAAGCGGTGGTGGTGAAGAGGTATAGGCAGATGAACAATGTGTCAAGAGATGAGTTCTCTGAACACATGGCAAGGATTGGTGATTTGTCTCATCCAAATCTGCTTCCTCTCGTTGCTTATTATTATCGGAAAGAAGAGAAACTCTTGCTCACTGACTTCGTTCCCAGGGGTTGCTTGGCCAGTCAGCTTCATGGTAATCATAACAACGAGAGGCCTGGGTTAAACTGGCCAACTCGTTTAAAAATTGTGAAAGGCGTAGCTAGGGGTTTGTCATATCTCTACACAGCATTACCAAGCCTAGTGGTGCCTCATGGTCATTTGAAATCTTCTAACATTTTGTTAGATGAAAATTATGAGCCTTTACTCACAGATTACGCCTTCATTCATGTCATCAATCTGGATCATGCTCAGCAGAGCATGATGCCGTACAAGTCACCGGAGTACGCACAGCTCGGCCGGATCACGAAGAAGACTGACGTGTGGAGCTTAGGCATCGTAATCCTGGAGATCCTAACGGGGAAGTTCCCAGAGAACTATCTGACTTTGAGGCACGATATCGGTTCAGACATTGCGAGCTGGGTGAACGGTATGATAACAGATAAGCGAACGAGTGAAGTGTTTGATGTTGAAATGGGAGGGATCGAGAATGGTAAGAGTGAGTTGCTAAAGCTTTTGAAGATTGGACTGAGTTGTTGTGAGGAGAATGTGGAGAGAAGATTTGATATAAAGGAAGCTCTTGAGCAGATTGAAGAGTTGAAGGATGAGAATGATGGAGATTTTTCTTTGATTGTCACTAGCGAACGGGATGCTTTTCAAGCTATATGA 1980 0.4702 MGALVRVPAATTSVLVPLLLLLLLWSSTPSLSYSDAEALLKFRSSLSNVVSLSSWDPAINPKPPCNGNIANWVGIFCINGSVWGFRLENMGLMGNIDVEALASMPRLRSISLMNNSFAGPLPEIQRMKNLKSLYLSYNHFSGSIPNEAFVDMNMLKKVYLANNQFNGEIPSSLGVLPSLLAVRLDGNKFHGRIPKFQNRTLKLIDMSNNDLEGPIPPSLASFSAFAFSGNAHLCGRPLENPCRSIPYANIDSPSKTSILRILLILVLTILIVVVIVSAIVIARLRNRQRNADDEYRSQHSVKYAPSAAYSKPKTMVDRENANFIAEKNKNYQKTRSISKKGEVGKLIFLRNREKKFDLQDLMKASAEVLGSAAFGSSYKTSLKGDQAVVVKRYRQMNNVSRDEFSEHMARIGDLSHPNLLPLVAYYYRKEEKLLLTDFVPRGCLASQLHGNHNNERPGLNWPTRLKIVKGVARGLSYLYTALPSLVVPHGHLKSSNILLDENYEPLLTDYAFIHVINLDHAQQSMMPYKSPEYAQLGRITKKTDVWSLGIVILEILTGKFPENYLTLRHDIGSDIASWVNGMITDKRTSEVFDVEMGGIENGKSELLKLLKIGLSCCEENVERRFDIKEALEQIEELKDENDGDFSLIVTSERDAFQAI 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00836 659 Coils Coil 620 640 - -
Accr6g00836 659 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Accr6g00836 659 Gene3D Ribonuclease Inhibitor 34 151 IPR032675 -
Accr6g00836 659 Gene3D Phosphorylase Kinase; domain 1 327 438 - -
Accr6g00836 659 FunFam Nuclear pore complex protein NUP107 32 195 - -
Accr6g00836 659 ProSiteProfiles Protein kinase domain profile. 363 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00836 659 ProSiteProfiles Leucine-rich repeat profile. 129 151 IPR001611 GO:0005515
Accr6g00836 659 Gene3D Transferase(Phosphotransferase) domain 1 439 654 - -
Accr6g00836 659 SUPERFAMILY Protein kinase-like (PK-like) 367 638 IPR011009 -
Accr6g00836 659 FunFam Pollen receptor-like kinase 1 439 646 - -
Accr6g00836 659 Gene3D Ribonuclease Inhibitor 152 244 IPR032675 -
Accr6g00836 659 Pfam Leucine rich repeat 129 189 IPR001611 GO:0005515
Accr6g00836 659 Pfam Protein tyrosine and serine/threonine kinase 367 631 IPR001245 GO:0004672|GO:0006468
Accr6g00836 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 641 IPR046959 -
Accr6g00836 659 FunFam pollen receptor-like kinase 1 332 438 - -
Accr6g00836 659 SUPERFAMILY L domain-like 62 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00836 Accr-Chr6 16734560 16738630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00836 14 655 Receptor kinase-like Gene Family AT5G35390 48.333 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr6g00836 PK_Tyr_Ser-Thr 1.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00836 - - gmx:100801053 773.852