Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00820 ATGGGAGCTGCAGCTTCTTCGTCATCATCCTCTGCAATTTTTCCCAAGAAACATGACGTGTTTCTGAGTTTCAGGGGTGAGGACACTCGCAAAACCTTCACCAGCCATCTTCACACTGCCCTATGCATGAGCGGTATTCGAACCTACATAGATTATGAACTCCCAAAAGGCGATGATATTTCCCAATCACTCGTTCAAGCAATTGAAGACTCGAGCATATCTGTGGTGATCTTGTCTGAAAACTATGCTTCCTCAAAATGGTGTTTGAACGAACTGGTTAAGATACTAGAGTGTAAAGAGGTCCAAGAACAGCTTGTTGTTCCTATTTTCTACCAAGTCGACCCATCTCATGTACGCAATCAAAAGGGAAGTTACCAGGAAGCATTTGCAAAACACTTTACTCAACAAAACCCTGAGAAGGTGAACCAGTGGAAACGTGCTCTTTTTGAAATTGCAAGCTTAGCTGGCTGGGATTCTCGGATGTTTAGGGACGAATCACAACTCCTTCGTAATATTGTCAATGACATTTTGAAAAGACTGAACCACATGTATCCAATTAGTACATTGCAAGGTGTTGTTGGAATTGAGGAGAATGCTGATTGTATTGAATCATTATTGGAAAATGTCTCAGTAATTGGAATTTGGGGCATGGGTGGTATAGGTAAAACAACAGTAGCTAAAGCTGTATTCACCAAGCTCTCCTTCCAATTTGAAAGTTGCTGTTTCTTTGAAAATTTAAGGGAAGAATCAGAAAAATATGGACTAAAGCATATACGAGACAAACTTCTCAGAGAACTATTGAAGGAAGAAGGGTCCATGGTTGGGTCCACATTTGCCATGAGAAGACTTAGTTGTAAAAAGGTTTTCATTGTGCTTGATGATGTTAATAATAGAAAGCAATTAGATTATTTGGCCGAAGAGTGTCGTTCTTTGGGACCTGGTAGTAAAGTCATCATTACGACAAGAGATAAACATTTGCTTCTTGGAAGAGTTAATGAAATATATGAAGCCAAGCCATTGAGCTATTACAAATCGGTTAGCCTTTTCAACCTCAAAGCCTTTCACAAAGATAATTATGAAAGTGGATATGAAGAACTATCTGAGAGAGTTGTTGCCTACACTAAAGGCAATCCTTTAGCTTTAATCACCTTGGGTTCATGTCTACATTCCAAAACTACAGATGAATGGGAAAGTGCTTTGAAAAAATTAGAAAAGACTACCCATGAAGATATTCATGCAGTGTTAAGATTGAGCTATGATGGACTAAATTATGAAGAGAGAGAAATGTTTTTGGAAATTGCTTGCTTTCTAAAAGGTGAAAGTGTAGCTAAAGTAGTAGCTCTTTTAGACAGCTATGGCCACCATGCAAGAATTGGCTTGAGGACCCTCGTAGATAAGGCTCTTATAAGCGTTTCTCATTATGTGGAGATGCATGATTTAATACAACAAGTTGGTCGAGAAATTGTTTGTCAAGAGTGCATAAAAGATCCTGGAAGACGAAGTCGACTATGGAATCCTGATGAAATCTATGCTATATTAAAAAATAATCAGGTAACGGATGCGGTTGAAGGCATTAGTTTAGATTTGTCCCAAGTTGGAGATATATGCCTAACTTCTAACACCTTAAAAAAGATGACTAATTTGAGATTCCTCAAATTCTATTCATCTAATTCGGATAGAAGGTCATGTGTGAAAATTCCCTCAAGCCTAGAGTCATTTTCCAAAGTATTATGTTATCTTCAATGGGAAAATTTTCCTTCCGAGGCTCTACCGTCATGTTTTTGTGCAGAGAAGCTTGTTGAACTTCGTATGAATGGGAGCAAGCTCAAAAAATTGTGGGGTGGAACTCAGGATTTGGTAAATTTAAGGGGATTAGACCTTGGTGGATCTAAGCAATTAGCGGAGCTGCCCGATTTCTCCAAGGCACAGAATCTTGAATGGGTGAATCTCTTCTCATGTGAAAGTTTATTCCATCTTCATCCATCTATTTTATCTCTCCATAGTTTAAAGTCCCTGTCGCTTACTAATTGCATAAACCTGAAGGATTTGCAAAGTGAGAGTCATTTAAAATCTCTAGAGAGCCTTAGTGTTGATAATTGCTATAGCCTGAAGGAATTTTCATTATCATCAGAGAGCATAAGTTTCTTACAATTAAATAGAACTGGCATTGAGTCTTTGGGCTCCTCAATTGGGCATCTCCAGAAACTTACTAATCTCTCACTCAATTGCTCAAGACTGAAGAATATTCCAGTCAATGAGTTTTATGGATTGAGATCTCTTAAGGATCTTTCTCTTTGTGGCTGTGGAGAGATAATTGATGAATCAAAGTTACATATCCTATTTGATGCTTTACAATCTCTAATTAGTTTTTATTTGGATGGAAGTTGCATCATAGCTGAGCTCCCCAGCAATATCAAGCATCTATCAAAACTAGAGTCTCTTTCCTTAATGAATTGCAAGAGCCTTCAATCTTTGCCTGAGCTCCCACCATCCATCAAAGAGTTAGATGCTACCAACTGCACTTTGTTGAAGACATCAATACTCACTTCTCATACGGAATTTCCATTGTTGCCACAGCAAATAATGCAGCAGAATATAAAACCCTCTTCCTCAATCAGGTATCTCAGAAACTTGAGGAGGCTTATTCTTTCAGATTGCAATGTAGGGAACCATTCACTTTCCCATGTTATGGCGTTTGCTTATTTCTGTTTGAAGCGTGGGGTACATAGAAATCAAATGGTTGATGTTTGCTATCCCGGAAGAGAAGTCCCAGATTGCTTTATACATAACCGGATGACAACTAAAGCTCCCAACTTCAAAACTATTGAGCTTTCTTCAACCATCAATAACTTGCAAGGCTTCATTTTCTACTCTGTTGTTCCGAAGTTTACTCCAAAGGAAAGCTGTTCTTACCGCTTAAAATGCCAAATTTATGATGAAGATGGTGATGAGTGTGGCACAAGCTTGAGTTTTGTCCTAACGAATGTTAATTCACGTCATGTTTTTCTATGGAACACTTATAGCAACGTATTAACAAAATATCCAGACGCCAATTACAAGCCAAGGCTTTCATTTGAATTCTATGTTGTTACATATGATAGGGATGATTTTATTGGGTTTAGTTTTATGAAGGAAATGAAACAGGATGGCTTGATTGAAGCATGTGGAGTCTGCCCAATATATGCCCCAGATTATCACAACTTCCCTCAACAAATGGAATTGGAGTTGGGAACGAAGGAACACACTACTTTTGATGATTTTGAGGAGCTTTCATTTCGTAGAATACTGGAATATGCTAGTTTCTCACTGAGACAAGAAACATGTGGTTATTTTGAAAGGAGTATTATTTCAGAGTGGTTTGCATACAAAAGCTTGACAGAAGGGTCTTCTGTCTTTGTTCAGCTTAATCCTAGTTTTGATGGCTTATTGGGTTTCATTTTCTGCTTTGTTATTCCTCAGTTCTCCTTAACAGAAAGGAATCGATGTCGCTCATTGTGTGGATACTATGATGAATATAACATTTATCAAGAAGGCCCTAGAGGATGGCACCATTCCATGATAGAATTGAATTCAAATAATGTTTTCCTATGGTATGATCCCCTCTATTGTGAACTCATTCTAGAGGATATTCAAAGCAGAACAGGCCATCGTAAAACTGGGAAAGATAAATCAAAGGTCACTTTTGAATTTAAGTTTGGTGATTGCTTGATCAAAGAATGTGGAGTTCACCCAATATATGCCTCAGAATACAGAGAGTTCCTTCAACAAAAGGAATTGAAGTTGGAGTCAATAACTGGAAGAAAGCGGCATCGGAACATTGATGATGAGCAACAGCAACCCACTCCCACAAAGAAATGGAAGAAGTGTTCAATGCTGAGTTTGAAGTCTAAGATAACTCATGATCTTGATGAGTTGCTATTTTCATTCTCACAGTTGAATTTGGCATGCGTGGAGGACCACATCCATCATATATAA 3975 0.3819 MGAAASSSSSSAIFPKKHDVFLSFRGEDTRKTFTSHLHTALCMSGIRTYIDYELPKGDDISQSLVQAIEDSSISVVILSENYASSKWCLNELVKILECKEVQEQLVVPIFYQVDPSHVRNQKGSYQEAFAKHFTQQNPEKVNQWKRALFEIASLAGWDSRMFRDESQLLRNIVNDILKRLNHMYPISTLQGVVGIEENADCIESLLENVSVIGIWGMGGIGKTTVAKAVFTKLSFQFESCCFFENLREESEKYGLKHIRDKLLRELLKEEGSMVGSTFAMRRLSCKKVFIVLDDVNNRKQLDYLAEECRSLGPGSKVIITTRDKHLLLGRVNEIYEAKPLSYYKSVSLFNLKAFHKDNYESGYEELSERVVAYTKGNPLALITLGSCLHSKTTDEWESALKKLEKTTHEDIHAVLRLSYDGLNYEEREMFLEIACFLKGESVAKVVALLDSYGHHARIGLRTLVDKALISVSHYVEMHDLIQQVGREIVCQECIKDPGRRSRLWNPDEIYAILKNNQVTDAVEGISLDLSQVGDICLTSNTLKKMTNLRFLKFYSSNSDRRSCVKIPSSLESFSKVLCYLQWENFPSEALPSCFCAEKLVELRMNGSKLKKLWGGTQDLVNLRGLDLGGSKQLAELPDFSKAQNLEWVNLFSCESLFHLHPSILSLHSLKSLSLTNCINLKDLQSESHLKSLESLSVDNCYSLKEFSLSSESISFLQLNRTGIESLGSSIGHLQKLTNLSLNCSRLKNIPVNEFYGLRSLKDLSLCGCGEIIDESKLHILFDALQSLISFYLDGSCIIAELPSNIKHLSKLESLSLMNCKSLQSLPELPPSIKELDATNCTLLKTSILTSHTEFPLLPQQIMQQNIKPSSSIRYLRNLRRLILSDCNVGNHSLSHVMAFAYFCLKRGVHRNQMVDVCYPGREVPDCFIHNRMTTKAPNFKTIELSSTINNLQGFIFYSVVPKFTPKESCSYRLKCQIYDEDGDECGTSLSFVLTNVNSRHVFLWNTYSNVLTKYPDANYKPRLSFEFYVVTYDRDDFIGFSFMKEMKQDGLIEACGVCPIYAPDYHNFPQQMELELGTKEHTTFDDFEELSFRRILEYASFSLRQETCGYFERSIISEWFAYKSLTEGSSVFVQLNPSFDGLLGFIFCFVIPQFSLTERNRCRSLCGYYDEYNIYQEGPRGWHHSMIELNSNNVFLWYDPLYCELILEDIQSRTGHRKTGKDKSKVTFEFKFGDCLIKECGVHPIYASEYREFLQQKELKLESITGRKRHRNIDDEQQQPTPTKKWKKCSMLSLKSKITHDLDELLFSFSQLNLACVEDHIHHI 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00820 1324 Pfam NB-ARC domain 204 414 IPR002182 GO:0043531
Accr6g00820 1324 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 182 - -
Accr6g00820 1324 Pfam TIR domain 17 190 IPR000157 GO:0007165
Accr6g00820 1324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 431 IPR027417 -
Accr6g00820 1324 Gene3D Ribonuclease Inhibitor 499 711 IPR032675 -
Accr6g00820 1324 Gene3D Ribonuclease Inhibitor 712 899 IPR032675 -
Accr6g00820 1324 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 709 IPR044974 GO:0006952
Accr6g00820 1324 Pfam C-JID domain 1116 1249 IPR045344 -
Accr6g00820 1324 SMART till_3 17 154 IPR000157 GO:0007165
Accr6g00820 1324 Gene3D - 183 332 IPR027417 -
Accr6g00820 1324 Gene3D - 340 423 IPR042197 -
Accr6g00820 1324 ProSiteProfiles TIR domain profile. 16 180 IPR000157 GO:0007165
Accr6g00820 1324 Pfam Leucine Rich Repeat 598 617 IPR011713 -
Accr6g00820 1324 Gene3D - 15 182 IPR035897 -
Accr6g00820 1324 PRINTS Disease resistance protein signature 282 296 - -
Accr6g00820 1324 PRINTS Disease resistance protein signature 806 822 - -
Accr6g00820 1324 PRINTS Disease resistance protein signature 211 226 - -
Accr6g00820 1324 PRINTS Disease resistance protein signature 374 388 - -
Accr6g00820 1324 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Accr6g00820 1324 SUPERFAMILY L domain-like 477 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00820 Accr-Chr6 16371741 16377256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00820 16 820 WRKY Transcription Factor Family AT4G12020 34.300 2.16e-110 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00820 - - pcin:129289671 1566.21