Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00808 ATGACCGCCACATCTGGAGGTTCCAACGACGGTGCCTCCGATGGTAATAATAATAATAATAATGTCTTTGTCACCGTCACCGTCGCCGCGCATCCGGCGGCTGATGATGACTCTCCTTCTACCTCCGCCGTCCACCACATTGACGTCAATGTCCACGACGATGACATACCGGAGGATTCGGAAGATCCTTTTGATATCGCTCAGACCAAAAATGCTCCTCGTGAGGCCCTTCAGCGATGGAGACAAGCAGCACTAGTGCTCAATGCCTCAAGGCGTTTTCGTTACACCCTGGACTTGAAAAAAGAAGAGGAGAAACTACAAAAGAAAAACTTGATTAGAGCCCACGCACAAGTCATAAGAGCCGCGCTGCTTTTCAAATTGGCCGGTGAACGTGAACTAGTTGTAACTACACCAGCGCGAACCCCCGCTCGAATAAATGTCGGCGATTTTGGAGTTGAACTTGAAGCACTTGCCTCAATGTTTAAGGAACATGACCTTTCTGCTTTAGAGGAATATGGAGGGGTCCAAGGTTTATCACATTTACTAAAATCCAGTCCCGAAAAAGGGATTATTGATAGTAATGATGATCTATTAAGAAGAAGAAGCGCATTTGGAACAAATACGTATCCTCGCAAAAAGGGGAAGAGTTTCTTTAGGTTTCTATGGGAAGCCTGGCAAGATCTGACCCTAATCATATTGATTGTAGCAGCTGTAGTTTCATTAGTACTTGGAATAAAAACAGAGGGTCTGGAAGAAGGGTGGTATGATGGGGGGAGCATTGCTTTTGCAGTTTTACTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTCGGAATTTGAATGCAGAAAAACAAAATATACAAATAGAGGTCATTAGAGGTGGTAGAATAGTCAAGATATCAATTTTTGATATTGTTGTTGGTGATGTTGTGCCTCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTTTTAATCACTGGCCACTCACTTGCCATTGATGAATCCAGCATGACTGGTGAAAGCAAAATTGTTCACAAAGACCATAAAGCACCATTTTTTATGTCTGGCTGCAAAGTAGCAGATGGAGTTGGTTCTATGCTGGTAACTGGTGTTGGTATCAATACTGAGTGGGGACTGTTGATGGCAAGTATATCAGAGGATACTGGCGAAGAGACTCCTTTACAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTGTAGTAGGGCTTTCAGTGGCTGTTCTTGTGTTGGGGGTCCTCTTGGCAAGGTACTTTACTGGGAACACAAAGGATCTGGAAGGAAATGTTGAGTTTGTCCGTGGAAAGACTAGCGTTAGTCGCGCAATCGATGGGGTCATCAAAATTTTCACCATAGCTGTCACAATTGTGGTTGTTGCAGTTCCTGAAGGTCTTCCCTTGGCTGTTACCTTAACCCTTGCTTACTCAATGCGAAAGATGATGGCAGATAAAGCCTTGGTACGGAGGCTCTCAGCATGTGAAACTATGGGTTCTGCTACAACAATTTGCAGTGATAAGACAGGAACATTGACATTGAATCAGATGACTGTAGTTGAGGCATATGTTGGGAAGAAGAATATAAACCTGCCAGATGACTTACCAGATTTGAACCCAGATGTTATATCTCTAATAAATGAGGGCGTTGCACAGAATACTAGTGGAAATGTTTTTGAGCCTAAGGATGGTGGAGAAGGAGAGATTACGGGATCTCCTACAGAAAAGGCAATCCTTTCTTGGGCTGTCAAGTTGGGAATGAAATTCGATCTTACCAAATCAAATTCAACAATTCTACATATCTTCCCCTTCAACTCTGAGAAAAAGCGAGGGGGTGCTGCACTGAAGCTGGCGGACTCTAGTGTACACATTCATTGGAAAGGAGCTGCAGAGATAGTTTTAGGTTCATGTACCCAATATCTTGATTCAGATGGTCAATTGCAATCTATTGACGGAGAGGACTTTTTCAAGGAGGCCATTGATGACATGGCTGCTCGCAGCTTGCGTTGTATTGCCATTGCATATAGATCATATGAAACAGATAGAGTTCCCTCTAATGAGGAGGATTTGGCCCAGTGGTCCTTGCCCGAGCATGAACTTGTTTTGCTTGCTATTGTTGGCATAAAGGATCCCTGTCGCCCTGGAGTCAAAGATGCTGTCAGAGTGTGCACTAATGCTGGGGTTAAGGTACGCATGGTTACCGGAGACAACATTCAGACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTTTCTTCAAATGATGATCTTGCTGAGCCAAATGTACTTGAAGGAAAGACATTCCGTGCATTATCTGAAAGTGAAAGAGAACAAGTTGCTAAACGAATTACTGTTATGGGGAGATCTTCTCCAAATGACAAGCTTTTGCTTGTACAAGCACTGCGTAAGGGAGGTGAAGTAGTTGCTGTCACAGGAGATGGTACTAATGATGCACCCGCACTTCATGAGGCAGATATTGGTCTATCAATGGGCATTCAAGGAACTGAAGTTGCTAAAGAAAGCTCGGATATCATAATCCTGGATGATGACATTGTATCAGTAGTGAAGGTTGTCCGATGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAACTCACGGTTAATGTTGCAGCTCTTGTTATAAATGTCGTTGCTGCAGTATCTTCTGGAGGTGTTCCTTTAAATGCTGTGCAGCTTTTGTGGGTCAACCTTATTATGGACACACTGGGCGCCCTTGCATTGGCCACTGAACCGCCTACCGACCATCTTATGCACAGAACACCAGTTGGCAGAAGGGAACCTCTTATAACAAATATCATGTGGAGGAACTTGATCGTGCAGGCTCTATATCAAGTTGCAGTTCTACTGGTTCTTCACTTTGGCGGCGATCAAATTCTAAGAAAGTATTACCCTAGAGCTCGTACACATCAGCTGAAGAATACTTTGATATTCAACGCATTTGTATTCTGCCAAATATTCAATGAGTTCAACGCTCGGAAACCAGACGAAATGAATGTCTTCCGAGGAGTGACTAAGAACCGCCTCTTCATTGGAATTATTGCATTCACATTAGTACTTCAGATAATCATCATTGAGTTCCTTGGAAAGTTCACATCAACCGTGAGGCTTGATTGGAAGATGTGGCTTATTTCTATTGCTATAGGGCTGGTCAGCTGGCCGCTAGCAGTGGTGGGGAAATTAATTGCAGTTCCAAAAACACCATTCTCACGGTACTTGTCGAAGCCATGGAGACTGATCAGGAAGCCTCGTGGTTTGTTGTTATAA 3327 0.4361 MTATSGGSNDGASDGNNNNNNVFVTVTVAAHPAADDDSPSTSAVHHIDVNVHDDDIPEDSEDPFDIAQTKNAPREALQRWRQAALVLNASRRFRYTLDLKKEEEKLQKKNLIRAHAQVIRAALLFKLAGERELVVTTPARTPARINVGDFGVELEALASMFKEHDLSALEEYGGVQGLSHLLKSSPEKGIIDSNDDLLRRRSAFGTNTYPRKKGKSFFRFLWEAWQDLTLIILIVAAVVSLVLGIKTEGLEEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFRNLNAEKQNIQIEVIRGGRIVKISIFDIVVGDVVPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKAPFFMSGCKVADGVGSMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLSVAVLVLGVLLARYFTGNTKDLEGNVEFVRGKTSVSRAIDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGKKNINLPDDLPDLNPDVISLINEGVAQNTSGNVFEPKDGGEGEITGSPTEKAILSWAVKLGMKFDLTKSNSTILHIFPFNSEKKRGGAALKLADSSVHIHWKGAAEIVLGSCTQYLDSDGQLQSIDGEDFFKEAIDDMAARSLRCIAIAYRSYETDRVPSNEEDLAQWSLPEHELVLLAIVGIKDPCRPGVKDAVRVCTNAGVKVRMVTGDNIQTAKAIALECGILSSNDDLAEPNVLEGKTFRALSESEREQVAKRITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDDIVSVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGGVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLIVQALYQVAVLLVLHFGGDQILRKYYPRARTHQLKNTLIFNAFVFCQIFNEFNARKPDEMNVFRGVTKNRLFIGIIAFTLVLQIIIIEFLGKFTSTVRLDWKMWLISIAIGLVSWPLAVVGKLIAVPKTPFSRYLSKPWRLIRKPRGLLL 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00808 1108 Gene3D - 525 721 IPR023299 GO:0000166
Accr6g00808 1108 Pfam E1-E2 ATPase 292 493 - -
Accr6g00808 1108 SUPERFAMILY HAD-like 513 926 IPR036412 -
Accr6g00808 1108 Gene3D - 512 866 IPR023214 -
Accr6g00808 1108 Gene3D - 194 391 - -
Accr6g00808 1108 FunFam Calcium-transporting ATPase 271 391 - -
Accr6g00808 1108 FunFam Calcium-transporting ATPase 838 1086 - -
Accr6g00808 1108 FunFam Calcium-transporting ATPase 223 280 - -
Accr6g00808 1108 SUPERFAMILY Calcium ATPase, transduction domain A 292 388 IPR008250 -
Accr6g00808 1108 Gene3D - 74 127 - -
Accr6g00808 1108 NCBIfam calcium-translocating P-type ATPase, PMCA-type 162 1083 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Accr6g00808 1108 PRINTS Sodium/potassium-transporting ATPase signature 508 529 - -
Accr6g00808 1108 PRINTS Sodium/potassium-transporting ATPase signature 258 278 - -
Accr6g00808 1108 PRINTS Sodium/potassium-transporting ATPase signature 634 652 - -
Accr6g00808 1108 SFLD p-type atpase 497 873 IPR044492 -
Accr6g00808 1108 SUPERFAMILY Calcium ATPase, transmembrane domain M 171 1084 IPR023298 -
Accr6g00808 1108 Pfam Cation transporter/ATPase, N-terminus 172 240 IPR004014 -
Accr6g00808 1108 Pfam Ca2+-ATPase N terminal autoinhibitory domain 61 104 IPR024750 GO:0005516
Accr6g00808 1108 FunFam Calcium-transporting ATPase 525 721 - -
Accr6g00808 1108 Pfam Cation transporting ATPase, C-terminus 906 1082 IPR006068 -
Accr6g00808 1108 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 522 718 IPR023299 GO:0000166
Accr6g00808 1108 Gene3D - 223 1078 - -
Accr6g00808 1108 NCBIfam HAD-IC family P-type ATPase 788 903 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr6g00808 1108 NCBIfam HAD-IC family P-type ATPase 454 538 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr6g00808 1108 SFLD Haloacid Dehalogenase 497 873 - -
Accr6g00808 1108 PANTHER CATION TRANSPORTING ATPASE 117 1084 - -
Accr6g00808 1108 FunFam Calcium-transporting ATPase 72 128 - -
Accr6g00808 1108 Pfam haloacid dehalogenase-like hydrolase 512 835 - -
Accr6g00808 1108 SMART Cation_ATPase_N_a_2 171 245 IPR004014 -
Accr6g00808 1108 CDD P-type_ATPase_Ca_PMCA-like 197 954 - -
Accr6g00808 1108 FunFam Calcium-transporting ATPase 9 plasma membrane-type 369 539 - -
Accr6g00808 1108 FunFam Calcium-transporting ATPase 714 866 - -
Accr6g00808 1108 ProSitePatterns E1-E2 ATPases phosphorylation site. 517 523 IPR018303 -
Accr6g00808 1108 PRINTS P-type cation-transporting ATPase superfamily signature 515 529 - -
Accr6g00808 1108 PRINTS P-type cation-transporting ATPase superfamily signature 339 353 - -
Accr6g00808 1108 PRINTS P-type cation-transporting ATPase superfamily signature 736 746 - -
Accr6g00808 1108 PRINTS P-type cation-transporting ATPase superfamily signature 821 840 - -
Accr6g00808 1108 PRINTS P-type cation-transporting ATPase superfamily signature 714 725 - -
Accr6g00808 1108 PRINTS P-type cation-transporting ATPase superfamily signature 845 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00808 Accr-Chr6 16146891 16165885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00808 17 1104 Primary Pumps ATPases AT3G21180 72.936 0.0 1590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00808 K01537 - gmx:100777143 1636.7