Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00797 ATGGCTTTCTGGGGAGTGGAAGTCAAACCTGGAAAATCTTTTACTCATAAATTTGATGACCTGAAAGGACGACTACATATTTCAATGGCCACTTTGGGGGTTGGTTCTGCCCCAGCCAAAAGCAGGCTTCAGTGTAATGTAGGCAATAATAGCCCTGTTTATCTATGCTCTCTGTCTTCTGGAGCGAATGAGTCATTGCAACTCAATTTGGAATTTGAGGAGGTTGATGATGTCATATTTTCAGTGGTTGGTCCTCGGGGTATTCACTTGTGTGGTTACTATATTGGTGGTGGCCGAAGAACCAATACCATTGAGGAGTCAGAATCCTATGGAGAAGATATTGCAAACACCGAGACAGATAGATCTGATTGCAGTGATGAAGATGAGTATGAGGGTAGTTTTATTGACGATGATGCCAATCCAGATGTCTACCCAGAATCACCTAGTTCAAGTGAAGAGGAAGCTTCATCTGTTGATAAACGTAAAGGTAGTCATCGCCGACTGCGGAAGAAGAACCAAAGAGTAGACTCAGATGATGACGCTCTGCCAATTTCATCTATATACAAGAGTAGAGCTTCTGCAAAAGTCTTCTCTGAGGAAATGGATGTTAGTGATGACAGGAGAGAAGGTGATGCCAACCACAAGAATGGCGACAATTCTGTTAAATCAAATTCAAAATCAAAGGCTGGCAATGTTCTTCTAGATACTAAGACAAATAGCTGTGGAGCTGAGTCTTTGGACAACTTAGTAGAACACCACACTGAATTAAATGTGAGGAGTGTTCAGAAATTGGAAAAAGATTATAGAGAAACAGAAAAGGAGGGTAAAGATGTTGAAGCGAAGGATGCTTGCAATGAACAATTTATCAAACAGAATAATGTGGTGGAAGGAGAGCCAAAAATGAAAAATATGGTCCAGGATCTTCTAATTAGAAATAGACAGAACAAGGGCCAAGCCTGTGATAAGGATGTTACATCGCCTGCCACAGGAGTTGGTCCTGTTAAAAGTGGAGGAACGAAGAGGAAAAGGAAAGAACAGACTCCCAAAGATTCACATTTTGAAGATGACGATGCATATTGTAAAGAGTCCAACACCCAAAGAGACTCGGCAGAGACTGCTACTGTGATCCCCAAATTTTCTGAAGGAAAGAATCAAGATTTGCAACAAAAAAACAAAGAGAGAGAGGACAATGGCACTCATGACTTTCCTGATGGGGAACGATCTAGTGATAGAAAAATGAAAAAGAGGAGGAAAAAAGTCAAAAGTCAGGGGGATATAGAAGTTAATGCTTCTGATATTCCTCGCTCATCTGTTAATGAAAATATTGAGGCTGTGAAAAATGATGAATGCATTACGGGTGATGTAAAGCCTTCTGAAGTTAAAACATTGCCAAATGGTCTAGTTATTCAAGAGCTAGGAAAAGGGATAGAAGATGGAAAAGTTGCTGCATCAGGGAAAAAGATTAGCGTCCTTTTCACTGGCAAGCTGAAGGATAATGACGAAGTCTTTGAGTCAAATGTTGGCCGTGCACCTTTCAAGTTTCGCCTTGGTAAAAGTCAAGTTTTAGAGGGTTGGGATGTTGGCCTTGAAGGCATGCGAATGGGAGGAAAGAGAAGACTCATAATCCCACCATCCATGGGGTTTGGTAGTGAAGGACACAACACAAAAGTACCACCGAACTCGTGGCTGGTTTATGACTTCGAATTGGTCAAAGTCCGTTGA 1722 0.4141 MAFWGVEVKPGKSFTHKFDDLKGRLHISMATLGVGSAPAKSRLQCNVGNNSPVYLCSLSSGANESLQLNLEFEEVDDVIFSVVGPRGIHLCGYYIGGGRRTNTIEESESYGEDIANTETDRSDCSDEDEYEGSFIDDDANPDVYPESPSSSEEEASSVDKRKGSHRRLRKKNQRVDSDDDALPISSIYKSRASAKVFSEEMDVSDDRREGDANHKNGDNSVKSNSKSKAGNVLLDTKTNSCGAESLDNLVEHHTELNVRSVQKLEKDYRETEKEGKDVEAKDACNEQFIKQNNVVEGEPKMKNMVQDLLIRNRQNKGQACDKDVTSPATGVGPVKSGGTKRKRKEQTPKDSHFEDDDAYCKESNTQRDSAETATVIPKFSEGKNQDLQQKNKEREDNGTHDFPDGERSSDRKMKKRRKKVKSQGDIEVNASDIPRSSVNENIEAVKNDECITGDVKPSEVKTLPNGLVIQELGKGIEDGKVAASGKKISVLFTGKLKDNDEVFESNVGRAPFKFRLGKSQVLEGWDVGLEGMRMGGKRRLIIPPSMGFGSEGHNTKVPPNSWLVYDFELVKVR 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00797 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 480 570 IPR001179 GO:0003755
Accr6g00797 573 MobiDBLite consensus disorder prediction 122 136 - -
Accr6g00797 573 Gene3D Nucleoplasmin core domain 1 97 - -
Accr6g00797 573 MobiDBLite consensus disorder prediction 306 430 - -
Accr6g00797 573 Coils Coil 571 573 - -
Accr6g00797 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 485 573 IPR001179 GO:0003755
Accr6g00797 573 MobiDBLite consensus disorder prediction 105 182 - -
Accr6g00797 573 MobiDBLite consensus disorder prediction 217 231 - -
Accr6g00797 573 SUPERFAMILY FKBP-like 444 572 - -
Accr6g00797 573 MobiDBLite consensus disorder prediction 365 384 - -
Accr6g00797 573 MobiDBLite consensus disorder prediction 385 411 - -
Accr6g00797 573 Coils Coil 261 281 - -
Accr6g00797 573 MobiDBLite consensus disorder prediction 195 231 - -
Accr6g00797 573 Gene3D - 435 573 IPR046357 GO:0003755
Accr6g00797 573 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Accr6g00797 573 MobiDBLite consensus disorder prediction 338 364 - -
Accr6g00797 573 MobiDBLite consensus disorder prediction 195 216 - -
Accr6g00797 573 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 42 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00797 Accr-Chr6 16040445 16046879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00797 470 573 Calmodulin-binding Proteins AT5G48570 36.190 2.32e-14 73.9