Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00796 ATGGAACTCCTATTATTTATCTTATGCTTGTCTGCCCCTTTATATGTTGCTTCCACCTTGAGTTCAGATGGGTTGACTCTACTGTCACTACTCAACCACTTGACTTCAGTGCCTCCTTCCTTAAAGTCAAGCTGGAATTCCTCTGATTCCACCCATTGCTCATGGATAGGAATACGATGTGACCAGTATGGCAAGGTGATCTCCCTAAACCTAACTGCATACAGTATTTTTGGTCAACTCGGACCAGAGATTGGACAATTGACTCATTTGCAGAACCTTGTGTTGGTTGCAAATGGTTTCTCAGGAAAAATACCTCTAGAATTAGGAAATTGTAGTCTGCTTGAGTATATCGACCTTTCTGATAACTCCTTCAGTGGAAGCATACCATATACATTGAAAACTTTGCAAAAGTTGAAGTATATACTTTTTTCTACCAATCTGCTCAATGGTGAAATTCCTGAGACGTTGTTTCAAATTCCTGAACTAGAGGGGATTGATCTTCACAATAACAATCTAGGTGGTCCCATCCCATCCAATATCGGGAACAACACTGGATTGTTGAAGCTGCATCTATCTAACAATCAGTTGTCAGGAACCATTCCCTCTTCCATAGGTAACTGCAGCAAACTAAAGGCATTGTTTGTGAATGATAACACATTCACAGGAATTTTGCCTGAGAGTCTGAACAATCTGAAGAATCTTGTTTATTTAGATGTCAAAAACAATAGCCTTGGTGGTACCATCCCTCTTGGCTCTGGAAGTTGTGGAAAGTTATTTATTTTGGATCTGTCATTCAATGTATTTAGTGGAGGCATTCCGTCAGGCTTGGGAAATTGTAGCAATTTAGCGGAGCTTGTTGTTGTGAAGAGCAACTTAGCTGGAAGTATTCCATCATCCCTAGGATTATTACTAAAGATTTCAATTCTTCGCCTTCCTTCGAACCATTTGTCCGGAAATATACCTCCAGAAATCGGCAACTGCAAATCCTTAAAGAAGTTACATCTATACTCCAATCAACTGGGGGGGCCAATTCCAAATGAATTAGGAGGATTGAGTAATTTGGAGGACCTTGAATTGTACTCCAACCATTTGACAGGTGAAATTCCACTGACTATTTGGAAGATTCAAAATCTTAAGCATGTCATCCTTCATAATAATAGCCTTTCAGGGAAATTACCTTCAGAGATGACAGAGCTCAAGCATCTGAAAAATATTTCATTGTTTGACAACCAATTCTCAGGATCAATTCCTCAAAACTTAGGAATCAATAGCAGTTTAGTGAAGCTGGACTTGATGAATAATACGTTTTCTGGTGACATACCACCAAATCTTTGTTTTGGAAAGCAACTACACACACTGAGTTTAGGTCTTAATCAACTTCAAGGGGCCATACCTCAAGTTTTGGGAAGATGTGCAACTCTTTGGAGGTTGGTTCTCAATGAAAATAATCTTTCTGGGTTTCTTCCTGACTTTGAAAGTAATCAGAATCTCATATACATGGACATGAGCAAGAACAACATCAGTGGAGTAATTCCATCAAGTTTGGGAAACTGCACAAGTCTCAAAGCACTAATTTTCTCCACGAATAACATTACAGGGCTTATTCCCATTGAGCTAGGAAATCTAGTGAACCTTCAGGTTTTGAATCTTTCTCACAACAACTTAGAAGGTCCTTTGCCACAAGAGCTGTCACACTGTACCAAAATGTTGACATTTGATGTGGGATTCAATTTTCTTAATGGTTCTTTCCCATCAAGCATGAAGAGCTGGACAAGGTTAACCAAATTAATTTTAAGAGAGAATCATTTTACTGGGGCCATCCCATCTTTCTTGTCAGAATATGATCAATTACTTGAGCTACAGCTTGGAGGAAATATGTTTGTGGGGAAGATTCCTACATCAATTGGATCATTGCAGAATCTCTTGTATGGGTTGAATCTGAGTGATAATAAATTAACTGGTGAGATTCCCTTAGAACTTGGGAAGTTGCAAAAGCTGCAAAGCCTGGATATATCTCTGAACAATTTGACAGGGGTCATACATGTTCTTGGTGAACTTTCTTCATTAATAGAAGTCAATATATCATACAACTCATTCTTTGGTCCTTTACCGGAATGGAGAATTCAACATCTGAATTTATCTCCATCATCGGTCATGGGCAATCCTGGCCTTTGTGTCTATTGTTCAACCTCAAATGGCTCCAGTTGTGCAAACTCTAGCCTATTGAAGCCATGCGACTTTGAATCAACTGGCCACGAAGGCAGTAAACGTTCAATTTTATTTATAGCACTTGGATTTGTAGGGTTTGTCATCTGTCTGTCAGGAATACTACTAATTTATGACCACCATTCTCGCCAGCTTTCTAGCCAAGGATCTGAAGAGGACGCCCTTTCTCCTAATTGGAAGCAAAATTTTAGCCGTGAATTTGGTCAAACAGCTATACTAATGGATGATTTTTTTTGTCAAGTGCCAGAGGCTTCATATTCAAGTGACAAAGGAGATTTCAGAATTATTGACCTGATAAATGCTACAGAAAATCTTGACGATAAATATATCATTGGTGAAGGAGCGCATGGAATAGTGTATAAAGCCGAACTTGGTATTGGGGTTTTTGCTATTAAGAAGGTTAAATTTGGACAAAGCAATAGGAGGAAATTAAACATGATCAAAGAAGTTGAAATGACTAGGAAGATTAGGCATCAAAATGTGGCAAGATCCCTTGGCTCCTGGATAGGCAATGAATATGGTCTAACCATTAGCAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTGCATGAAAACAATCCACTTCCATACTTAGCTTGGAATGTCCGCTATAAGATTGCTTTTGGAATTGCAAAAGGGCTGGCATATCTCCATCACGACTTTGATCCTCCCATATTGCATCGAGACATCAAACCTAAGAATATACTCCTCGACTCTGATATGCAGCCTTATATTACTGATTTTGGTATATCAATTGCTTTGAATCAGTCCTCTACTGTGATGAATATGCGGTCAACATATCATCTAGGTACACCTGGGTTTATGGCTCCAGAGATTGCATATGCGATAGCACCAAGGTGTGAGCTTGACATATATGGTTATGGAGTAGTATTGCTTGAGCTGATAACCAGAAAGAAAGTATTAGATTACTCATTTGCGAAGGAGGAAACCACTTTAGTAATGTGGATTAAGTCTGTGTGGAGGAAAACAAGAAAACTTGAAGAGATTGTTGATTCAAGCCTTGCATGGGAGCTTTCAGATGTAAATGTGAAAGCACAGGTTATCAAAGTTCTTTTGGCGGCTTTGATATGTACTCAGAAAGATCCAAGAAAGAGACTTAAAATGATAGATATTGTTGAATTCTATGAAACACCCACAGATCCAGGAATTTTGTTTCGACCTGACAATGGTTCATTTCATTTGGGAAATTCCGTCGTGACTGCTTTGGCCTCTTTATTTTTTCAGGAGGAAGTCAAGATCCCCGCCAGTGAGGGTTCTTTCTCAGCTCTAGACGAAGTGGAGGCTACTGCAGACCCAAACAATCTCAATATCATCCCTAGAGGAACTCCTGGAGTTGTTTCTAAAGTTCGAACGCATTCAGGCATAATCAGTGCTGAAAAGAAGCTTACCTTTGCCGGGAACTTGGGCAATATCTTAAGTGCAGCTGCAGAAGTTGGAATCCTTGGAAAGATTAGGCATCGAAATATAGTTAGGATGCTGCATTGTTCCTTAAAAAAAGACTACGGTTTAATATGGTATGAGTACATGGAAAATGGAAACCTACATGATCTTTTGCATGGAAAGAACCCTCCACCACCACTAAACTGGGCTGTCCGTTATCAGATAGCGACTGGAATTGCTCATGGCTTGGCCTATCTTCATTATCATTGTTACCCTGCCGTCGTGCACTGTGCCATCAAACCAAAAAATATACTGCTAGATTCTGATATGGAGCCTCATATTGCCGATTTCAGTAGTGCCAAACTTTTGGATGAATATATGCCATTGCCATCATCATCTATTCTAGGCACACTAGGGTACATAACCCCAGAAAATACACATAAAACAGCAATTACCAGGGAGTTTGATGTGTACAGTTATGGGGTAGTGTTGCTTCAGTTGATAACCCGAAATAAAGCAGTAGATCAATCATTTATGTCGGGATCTGAGATAGTGGTTTGGGTCAGAAGTCTGTGGAGGGAGGCACGAGACATTTTTAAAATCGTTGATTCAGGCCTTGCAACGGAGCTGTTCACTGCGCGTACCAATGTATTCGACCAAGTCACCAGAGTGCTTTCCATGGCTCTGAGTTGCACCGAGGAGGATCCAAGCATGAGGCCTACCATGAGAGATGTTATCAACGAATTAGTGAGATTGTAA 4389 0.399 MELLLFILCLSAPLYVASTLSSDGLTLLSLLNHLTSVPPSLKSSWNSSDSTHCSWIGIRCDQYGKVISLNLTAYSIFGQLGPEIGQLTHLQNLVLVANGFSGKIPLELGNCSLLEYIDLSDNSFSGSIPYTLKTLQKLKYILFSTNLLNGEIPETLFQIPELEGIDLHNNNLGGPIPSNIGNNTGLLKLHLSNNQLSGTIPSSIGNCSKLKALFVNDNTFTGILPESLNNLKNLVYLDVKNNSLGGTIPLGSGSCGKLFILDLSFNVFSGGIPSGLGNCSNLAELVVVKSNLAGSIPSSLGLLLKISILRLPSNHLSGNIPPEIGNCKSLKKLHLYSNQLGGPIPNELGGLSNLEDLELYSNHLTGEIPLTIWKIQNLKHVILHNNSLSGKLPSEMTELKHLKNISLFDNQFSGSIPQNLGINSSLVKLDLMNNTFSGDIPPNLCFGKQLHTLSLGLNQLQGAIPQVLGRCATLWRLVLNENNLSGFLPDFESNQNLIYMDMSKNNISGVIPSSLGNCTSLKALIFSTNNITGLIPIELGNLVNLQVLNLSHNNLEGPLPQELSHCTKMLTFDVGFNFLNGSFPSSMKSWTRLTKLILRENHFTGAIPSFLSEYDQLLELQLGGNMFVGKIPTSIGSLQNLLYGLNLSDNKLTGEIPLELGKLQKLQSLDISLNNLTGVIHVLGELSSLIEVNISYNSFFGPLPEWRIQHLNLSPSSVMGNPGLCVYCSTSNGSSCANSSLLKPCDFESTGHEGSKRSILFIALGFVGFVICLSGILLIYDHHSRQLSSQGSEEDALSPNWKQNFSREFGQTAILMDDFFCQVPEASYSSDKGDFRIIDLINATENLDDKYIIGEGAHGIVYKAELGIGVFAIKKVKFGQSNRRKLNMIKEVEMTRKIRHQNVARSLGSWIGNEYGLTISRYMENGSLHDVLHENNPLPYLAWNVRYKIAFGIAKGLAYLHHDFDPPILHRDIKPKNILLDSDMQPYITDFGISIALNQSSTVMNMRSTYHLGTPGFMAPEIAYAIAPRCELDIYGYGVVLLELITRKKVLDYSFAKEETTLVMWIKSVWRKTRKLEEIVDSSLAWELSDVNVKAQVIKVLLAALICTQKDPRKRLKMIDIVEFYETPTDPGILFRPDNGSFHLGNSVVTALASLFFQEEVKIPASEGSFSALDEVEATADPNNLNIIPRGTPGVVSKVRTHSGIISAEKKLTFAGNLGNILSAAAEVGILGKIRHRNIVRMLHCSLKKDYGLIWYEYMENGNLHDLLHGKNPPPPLNWAVRYQIATGIAHGLAYLHYHCYPAVVHCAIKPKNILLDSDMEPHIADFSSAKLLDEYMPLPSSSILGTLGYITPENTHKTAITREFDVYSYGVVLLQLITRNKAVDQSFMSGSEIVVWVRSLWREARDIFKIVDSGLATELFTARTNVFDQVTRVLSMALSCTEEDPSMRPTMRDVINELVRL 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00796 1462 SUPERFAMILY Protein kinase-like (PK-like) 1170 1459 IPR011009 -
Accr6g00796 1462 SUPERFAMILY RNI-like 223 533 - -
Accr6g00796 1462 Gene3D Ribonuclease Inhibitor 287 397 IPR032675 -
Accr6g00796 1462 Pfam Protein kinase domain 1187 1457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00796 1462 Pfam Protein kinase domain 850 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00796 1462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Accr6g00796 1462 Pfam Leucine rich repeat 186 244 IPR001611 GO:0005515
Accr6g00796 1462 Pfam Leucine rich repeat 496 555 IPR001611 GO:0005515
Accr6g00796 1462 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 448 734 - -
Accr6g00796 1462 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 337 1122 - -
Accr6g00796 1462 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 923 1127 - -
Accr6g00796 1462 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 178 272 - -
Accr6g00796 1462 Gene3D Ribonuclease Inhibitor 181 286 IPR032675 -
Accr6g00796 1462 FunFam MDIS1-interacting receptor like kinase 2 isoform A 318 420 - -
Accr6g00796 1462 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Accr6g00796 1462 ProSitePatterns Protein kinases ATP-binding region signature. 853 875 IPR017441 GO:0005524
Accr6g00796 1462 Gene3D Phosphorylase Kinase; domain 1 827 919 - -
Accr6g00796 1462 Gene3D Ribonuclease Inhibitor 398 735 IPR032675 -
Accr6g00796 1462 Gene3D Transferase(Phosphotransferase) domain 1 923 1130 - -
Accr6g00796 1462 Gene3D Transferase(Phosphotransferase) domain 1 1259 1462 - -
Accr6g00796 1462 Gene3D Ribonuclease Inhibitor 23 180 IPR032675 -
Accr6g00796 1462 ProSiteProfiles Protein kinase domain profile. 1182 1462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00796 1462 SMART serkin_6 847 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00796 1462 SMART serkin_6 1182 1460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00796 1462 SUPERFAMILY L domain-like 489 726 - -
Accr6g00796 1462 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1259 1462 - -
Accr6g00796 1462 SUPERFAMILY L domain-like 22 303 - -
Accr6g00796 1462 SUPERFAMILY Protein kinase-like (PK-like) 831 1125 IPR011009 -
Accr6g00796 1462 ProSiteProfiles Protein kinase domain profile. 847 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00796 1462 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 177 - -
Accr6g00796 1462 SMART LRR_typ_2 663 686 IPR003591 -
Accr6g00796 1462 SMART LRR_typ_2 184 207 IPR003591 -
Accr6g00796 1462 SMART LRR_typ_2 231 255 IPR003591 -
Accr6g00796 1462 SMART LRR_typ_2 351 375 IPR003591 -
Accr6g00796 1462 SMART LRR_typ_2 159 183 IPR003591 -
Accr6g00796 1462 SMART LRR_typ_2 542 566 IPR003591 -
Accr6g00796 1462 Gene3D Phosphorylase Kinase; domain 1 1171 1258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00796 Accr-Chr6 16030676 16036529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00796 1153 1456 Receptor kinase-like Gene Family AT1G73080 46.326 2.40e-75 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr6g00796 Pkinase 1.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00796 - - pcin:129288364 2061.96