Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00794 ATGAAGCTCCCATTATTTATCCTATGCTTGTCTGCTCCTTTCTATGTCACTTCTACCCTGAGTTTGGATGGGTTGACTCTATTATCACTCCTCAACCACTGGACTTCCATGCCTCCTTCCTTAAATTCAAGCTGGAAGTCCTCTGATTCTACCCCATGTTCATGGCCAGGGATACAATGCGACCTCTACAAAAACGTTGTCTTCATAAACCTCACCGCATCTCAGATTTTTGGTCAGCTTGGGCCAGAAATTGGACGGTTGACTCACTTGCAGAAACTTTTGCTGGCCTCAAATGGTTTCTCAGGTACAATACCCCCAGAGTTAGGTAATTGTAGTATGCTTGATTTTATTGATCTTTCTGAGAATCATTTGTCAGGAAATATACCTCCAGAAATTGGTAATTGCAAATCTTTGAAGTCGTTACTTTTCTATTCAAATCAACTGGAGGGAGCCATTCCGAATGAATTGGGAAGCCTAAGAAAATTGGAGGACCTTGAATTCAATTTCAACCGTTTGACAGGTGAAATTCCACTTTCCATTTGGAAGATTCAGAGTCTTAAGCATGTCCTTCTTCATCATAATAGCCTTTCAGGGAAATTACCTTCAGAGGTAACAGAGCTCAAGCATCTGAAAAATATCTCATTGTTTGACAACCAATTCTCTGGAACAATTCCTCAAAGCTTGGGAATCAATAGCAGTTTAGTGAAGCTGCACTTGATGAATAATAAGTTCACTGGTTACATCCCTCCAAATCTTTGTTTACTTCAAGGGGGCATACCTCAAGATTTGGGAAGATGTGCAACTCTTGCATGGTTGGTTCTCAATGACAACAATCTTTGTGGGTCTGTTCCTAAATTTGAAGGTAATAACAATCTCATTTACATGGACATCAGCAGGAACAACATCAGTGGATCAATTCCACCGAGTTTGGGAAACTGCTCAAATCTCATTGGTTTAATTTTGTCCACAAATAACATTACAGGGCTTATACCCATTGAGCTAGGAAATCTAGTGAACCTTCAGGGTTTGAATCTTGCTCACAACAACTTAGAAGGTCCTTTGCCACAGGAGCTGTCATACTGTACTAAAATGTTTACATTTGATGTGGGATTCAATTTTCTTAATGGTTCTTTCCCATCAAGCATGAAGAGCTGGACAGGGTTAGCCAAATTAATTTTAAGAGAGAATCATTTTAGTGGGGTTGCCCCTTTGTTCTTCTTAGATACCCAGCTTCTCGAGTTACAACTTGGTGGAAATATGTTTGCTGGAGAAATTCCCACTTCCATTAGATCATTGATTCCCTTATATGAGTTGAATCTGAGTTCTAATAAATTAACAGGTGAGATCCCTGATACATTTGCGGAGCTGTCAATGCTTCAAAGCTTGGATTTAAGTCTGAACAATTTTTCAGGAAACATACAAGTTCTTGGCAGCCTTATATCATTATCAAAAGTCAATATATCAAACAACTCATTCTCTGGTCCTTTACCACAATGGACAACGCAACTGCTGGAAAGGAGAAAGCAACAGCTGGAATTATCTCCATCATCATTCTTGGGCAATCCTGGCCTTTGTGTCGATTGTTCAATTTTAGATAACTTAATTTGCATAAATTCTACAAATTTGAAGTCATGTGACTCTACATCAATTGACCACAAAGGCAGTAAGCTACCAAAATTAGTAGTGTTTGTCATTTGCCTGACATTTGTAGTTCTTTGCCTCCCATCTGTCATTTACATCAGCTGGTTTGCTCAAATATCTAACGTGGTGGTCAATGTTGATTATGAAGAGCAAGAGGCTTTGTTTTCAAATGATGAGGGATATTTCAGTATTATTAACCTACTAGAAGCTACAGAACATCTACGTGATGAATATATAATTGGTGAAGGAGGGCAGGGAATTGTTTATAAAGCTGAACTTGATATTGGAGTTTTTGCTATTAAGAAGGTTAAATTTGCGAAAAGCAATAGGAGGAAATCAAACATGATCAGAGAAATTGGAATGACTAGGAAGATTAGGCATAAAAATGTGGCAAGATGCCTAGGCTCCTGGATTGGTGAGGAATATGGTCTAATTGTCAGCAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTGCATGAAAACAATCAACTACCATGCCTAGCATGGAATGTCCGCTATAAAATTGCTATTGGAATTGCAAAAGGACTATCATATCTTCATCATGATCATGATCCCCCCATATTGCATCGAGACATCAAACCGAAGAATGTACTACTTGACTCTGATATGCAGCCTTGTATTACTGATTTTGGTATTTCGATTGCTTTGAATCAGCCCTCTACTACAATGCATTTGCGGTCAACATATCATCTAGGTACTCGTGGGTTTATGGCACCAGAGATTGCATCTGTGGCAGTGCCAAGCTGTGAGCTTGATGTTTATAGTTATGGGGTAATTTTGCTTGAGCTGATAACCAGAAAGAAAGTGTTAGATTCCTCATTTGTGGAAGAGGAAACCACTTTGGTAGGGTGGTTTAAAGCTGTATGGAGGAGAACGAATGGACTTGAAGAGATTGTTGATTCGTCCATTGTAAGGGAGCTTTCAGATTTAAATGTAAAGGTGCAAATTATCAAAGTGATTTTGGTGGCTCTAATATGTACTGAGACAGATCCAGGAAAGAGACTGAAAATGAGAGATGTCATCGAATTCTTTGAAACGCCCGCTGATCCAGGAATTTTCATTCAGCATGACGGAGCATTTCATTTAGGAAGTTTTCTTGCTACTGCTGCTGCCTCTATACTTTTTCAGGAGGAAGTCAAGATCGCTGCCAGTAGAGGTTCTTTCCCAATTCTTCACGAGATGATGGAGCATAATGAAAGATTCAATAATCGAAATATTATTGGCAGAGGAACTCATGGTGTTGTTTATAAATTTTCAGTAGGGGCATCCCAGTTTTATGCTGTAAAAAAGGTTGCATTTGCAGGGAACAAAAGAAGGATTGGAAGCATAGCTAGAGAAATTGAGATCATTGGAAATATTAGGCACCGAAATCTAGTCAGATTGCTAGACTTTTTGTTTGAAAAAGACCATTGTCTAATCTTGTACAATTACTTGCCAAATGGAAACCTTCATGATGTTTTGCATGAAAAGAATCCACTCCCATGCCTAGGGTGGAATGTCCGGTATAGGATAGCTGTTGGAATTGCTCATGGATTGACTTATCTCCATTATGATTGTCATCCTGCCATAGTTCACTGTGCCATCAAACCTAAAAATATACTTTTGGATTCTGATATGGATCCTTGTATCGCTAATTTTGGTATTTCCAAGCTTTTGGATCAGTTTTCGTCAACAACATCTACACCAGTTCCAGGCACACAAGGGTATATAACTACAGATAATACATATACAACAGCAAAGACCAGAGAGTTTGATGTCTACAGTTATGGGATGGTTTTGCTTCAGTTGATAACAAGAAAGAAGGCAGTAGATCCATCATTTATGAATGGAACTGAGATAGGAATTTGGGTTAGATCTCGATGGAGGGAAACAGGAGACATTCATACAATTGTTGATTCAAGCCTTGCAGAGGAGGTTTTGAATTCAAATGTACTTGAACAAGTCACCATAGTGCTTTTGTTGGCCCTGAGTTGCACAGAGAAGAATCCACACATGAGACCCTCAATGAGACATGTCATCAAGAAATTGAAAGATGCTTATCCAAGGACAACGAGGAAAAGCTTCCAAGTTCAAACTCCTTAA 3747 0.3899 MKLPLFILCLSAPFYVTSTLSLDGLTLLSLLNHWTSMPPSLNSSWKSSDSTPCSWPGIQCDLYKNVVFINLTASQIFGQLGPEIGRLTHLQKLLLASNGFSGTIPPELGNCSMLDFIDLSENHLSGNIPPEIGNCKSLKSLLFYSNQLEGAIPNELGSLRKLEDLEFNFNRLTGEIPLSIWKIQSLKHVLLHHNSLSGKLPSEVTELKHLKNISLFDNQFSGTIPQSLGINSSLVKLHLMNNKFTGYIPPNLCLLQGGIPQDLGRCATLAWLVLNDNNLCGSVPKFEGNNNLIYMDISRNNISGSIPPSLGNCSNLIGLILSTNNITGLIPIELGNLVNLQGLNLAHNNLEGPLPQELSYCTKMFTFDVGFNFLNGSFPSSMKSWTGLAKLILRENHFSGVAPLFFLDTQLLELQLGGNMFAGEIPTSIRSLIPLYELNLSSNKLTGEIPDTFAELSMLQSLDLSLNNFSGNIQVLGSLISLSKVNISNNSFSGPLPQWTTQLLERRKQQLELSPSSFLGNPGLCVDCSILDNLICINSTNLKSCDSTSIDHKGSKLPKLVVFVICLTFVVLCLPSVIYISWFAQISNVVVNVDYEEQEALFSNDEGYFSIINLLEATEHLRDEYIIGEGGQGIVYKAELDIGVFAIKKVKFAKSNRRKSNMIREIGMTRKIRHKNVARCLGSWIGEEYGLIVSRYMENGSLHDVLHENNQLPCLAWNVRYKIAIGIAKGLSYLHHDHDPPILHRDIKPKNVLLDSDMQPCITDFGISIALNQPSTTMHLRSTYHLGTRGFMAPEIASVAVPSCELDVYSYGVILLELITRKKVLDSSFVEEETTLVGWFKAVWRRTNGLEEIVDSSIVRELSDLNVKVQIIKVILVALICTETDPGKRLKMRDVIEFFETPADPGIFIQHDGAFHLGSFLATAAASILFQEEVKIAASRGSFPILHEMMEHNERFNNRNIIGRGTHGVVYKFSVGASQFYAVKKVAFAGNKRRIGSIAREIEIIGNIRHRNLVRLLDFLFEKDHCLILYNYLPNGNLHDVLHEKNPLPCLGWNVRYRIAVGIAHGLTYLHYDCHPAIVHCAIKPKNILLDSDMDPCIANFGISKLLDQFSSTTSTPVPGTQGYITTDNTYTTAKTREFDVYSYGMVLLQLITRKKAVDPSFMNGTEIGIWVRSRWRETGDIHTIVDSSLAEEVLNSNVLEQVTIVLLLALSCTEKNPHMRPSMRHVIKKLKDAYPRTTRKSFQVQTP 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00794 1248 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 255 899 - -
Accr6g00794 1248 ProSitePatterns Protein kinases ATP-binding region signature. 962 985 IPR017441 GO:0005524
Accr6g00794 1248 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1033 1244 - -
Accr6g00794 1248 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Accr6g00794 1248 Gene3D Ribonuclease Inhibitor 253 530 IPR032675 -
Accr6g00794 1248 SUPERFAMILY L domain-like 23 285 - -
Accr6g00794 1248 Gene3D Phosphorylase Kinase; domain 1 931 1032 - -
Accr6g00794 1248 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 697 903 - -
Accr6g00794 1248 SMART serkin_6 956 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00794 1248 SMART serkin_6 621 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00794 1248 ProSiteProfiles Protein kinase domain profile. 621 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00794 1248 Pfam Protein kinase domain 624 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00794 1248 Pfam Protein kinase domain 957 1229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00794 1248 SUPERFAMILY L domain-like 253 504 - -
Accr6g00794 1248 SUPERFAMILY Protein kinase-like (PK-like) 607 898 IPR011009 -
Accr6g00794 1248 Gene3D Ribonuclease Inhibitor 182 252 IPR032675 -
Accr6g00794 1248 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 58 252 - -
Accr6g00794 1248 Gene3D Phosphorylase Kinase; domain 1 584 696 - -
Accr6g00794 1248 Gene3D Ribonuclease Inhibitor 23 179 IPR032675 -
Accr6g00794 1248 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 253 539 - -
Accr6g00794 1248 ProSiteProfiles Protein kinase domain profile. 956 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00794 1248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Accr6g00794 1248 Gene3D Transferase(Phosphotransferase) domain 1 697 904 - -
Accr6g00794 1248 Gene3D Transferase(Phosphotransferase) domain 1 1033 1246 - -
Accr6g00794 1248 SUPERFAMILY Protein kinase-like (PK-like) 943 1231 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00794 Accr-Chr6 16009176 16014143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00794 64 900 Receptor kinase-like Gene Family AT1G73080 43.056 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr6g00794 Pkinase 9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00794 - - pcin:129289575 1743.78