Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00793 ATGGATAATTTTGATGTGGGATTCAATTTCCTGAATGGTTCATTTCCTCCAAGTTTGAGGAGCTGGACGGTGCTAACAACATTAAGTCTAAGAGAGAATCAGTTTCACGGAGGCATCCCGGCTTTCTTGTCAGAATTTAGCAGGCTTTCTGAGCTACAGCTTGGTGGAAACATGTTTGGAGGAAAAATTCCAGGGTCAATTGGGGCGTTGCAGAATCTGCTCTATGGGTTGAATCTAAGTGCTAATGGGCTGATTGGTGAAATTCCTCGAGAGATGGGAAAATTAGTGAACCTCCTAAGTTTGGATCTGTCTCAAAACAATTTGAGTGGAAGTATAGGAGTTCTTGCTGAGCTTTATTCATTACTCAAAGTCAATGTTTCATACAATTCCTTTGATGGTCCTGTACCGGAGACACTGATGAAGCTGCTCAATTCTGATCCTTCATCATTTTCAGGAAATCCCGGCCTATGTGTCAGTTGTTCATCATCAAACAGATTGAATTGTAATCAAAGCAGCCATCTAAAGCCATGTGATGATAGATTGAAAAACCAAAAAGGGCTAAGTAAAGTACAAGTAGCAATGATATCACTTGGATCATCAATATTTTTTGGTCTTTTGCTGCTAGGAGTAGTCTATATGTGTGTATGCAGCAGAAAATCTAAGCAAGAAGACGATATCTCTGCCAGAGAAGGCAATTCTTTGCTGCTTAACAAAGTGATGGAGGCTACTGCTAACCTAAGTGACCGGTTCATCATCGGTAGAGGAGCTCATGGAGTAGTTTATAAAGCTTCATTAGATTCAGGCGAAGTTTTTGCTGTGAAGAAGCTTGCATTTTCTGGGAACAAAGGCAAGAGCATGGACAGAGAAATCCAAACCCTTGGAAAGATTAGGCACCGGAATCTGGTCAAACTGGAAGACTTTTGGACGAGAAAAGACTTTGGTCTGATCTTGTACACCTACATGCAAAATGGTAGCCTTCATGAAGTCTTGCACGAAAAGCATCCTCCACCATCTTTAGAGTGGAATGTCCGGTATAAGATAGCCATTGGCGTTGCTCATGGATTGGCCTATCTCCATTATGATTGTGATCCTCCCATAGTACACCGTGACATCAAACCAAAAAACATACTCCTAGATTCTGATATGGAGCCTCACATTGCTGATTTTGGTATCGCCAAGCTTTTGGACCAATCTTCTGCTTCAGCTCCATCTATATCTGTCCCCGGCACAGTCGGGTACATTGCACCAGAGAATGCATACAGAACGGCGAATAATAGAGAATCTGATGTATACAGTTACGGGGTAGTTTTGTTTGAGTTGATGACGAGAAAGATGGCAGTGGATCCTTCATTTATGGAGGGAGTTGATATTGTGAACTGGGTTAGAACTCTGTGGGAAGGAACAGAAGATGTTCATAAAATTGTTGATTCAGGTCTTGCAGTTCAGTTTCTTGATTCAAATGTTCTTGAACAAGCTACTAAAGTGCTTTCAGTGGCTCTGAAATGCACCGAGAAGGATCCACGCTTGAGGCCCACGATGAGAGATGTTGTCAAGCAATTAGAAGATGCTAATCCAAGGACAAGGAGTAAAAAGATTCCAAGTTCCAACTCCTTAATCTGTGGTTGA 1626 0.4182 MDNFDVGFNFLNGSFPPSLRSWTVLTTLSLRENQFHGGIPAFLSEFSRLSELQLGGNMFGGKIPGSIGALQNLLYGLNLSANGLIGEIPREMGKLVNLLSLDLSQNNLSGSIGVLAELYSLLKVNVSYNSFDGPVPETLMKLLNSDPSSFSGNPGLCVSCSSSNRLNCNQSSHLKPCDDRLKNQKGLSKVQVAMISLGSSIFFGLLLLGVVYMCVCSRKSKQEDDISAREGNSLLLNKVMEATANLSDRFIIGRGAHGVVYKASLDSGEVFAVKKLAFSGNKGKSMDREIQTLGKIRHRNLVKLEDFWTRKDFGLILYTYMQNGSLHEVLHEKHPPPSLEWNVRYKIAIGVAHGLAYLHYDCDPPIVHRDIKPKNILLDSDMEPHIADFGIAKLLDQSSASAPSISVPGTVGYIAPENAYRTANNRESDVYSYGVVLFELMTRKMAVDPSFMEGVDIVNWVRTLWEGTEDVHKIVDSGLAVQFLDSNVLEQATKVLSVALKCTEKDPRLRPTMRDVVKQLEDANPRTRSKKIPSSNSLICG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00793 541 Gene3D Phosphorylase Kinase; domain 1 210 320 - -
Accr6g00793 541 Pfam Protein kinase domain 251 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00793 541 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 41 166 - -
Accr6g00793 541 SUPERFAMILY L domain-like 5 164 - -
Accr6g00793 541 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Accr6g00793 541 SUPERFAMILY Protein kinase-like (PK-like) 233 520 IPR011009 -
Accr6g00793 541 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Accr6g00793 541 PANTHER LEUCINE RICH REPEAT KINASE 2 5 528 - -
Accr6g00793 541 Gene3D Transferase(Phosphotransferase) domain 1 321 537 - -
Accr6g00793 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Accr6g00793 541 Gene3D Ribonuclease Inhibitor 2 176 IPR032675 -
Accr6g00793 541 ProSiteProfiles Protein kinase domain profile. 246 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00793 541 FunFam Serine/threonine-protein kinase-like protein CCR4 321 538 - -
Accr6g00793 541 MobiDBLite consensus disorder prediction 522 541 - -
Accr6g00793 541 SMART serkin_6 246 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00793 541 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 212 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00793 Accr-Chr6 15999378 16001216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00793 1 529 Receptor kinase-like Gene Family AT1G73080 55.064 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr6g00793 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00793 - - gmx:100778035 733.021