Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00792 ATGAGGCATCTCTGGTTGCTTCTTCTTCCTCTATGCTTTTATTCATTGTTATGCTCTGTTTCTGCTTTGAGCTCTGATGGGGTGACCCTAATGTCACTCTTGAGGCACTGGACTTCTGTACCTCATGCTGTGAAGTCCACGTGGAATCTCTCCGATTCCACTCCTTGCTCTTCTTGGGTTGGGGTCCAGTGTGACCATGCTCACAATGTTATCTCCCTTAACCTCACTGAGTATGGGATTGAAGGTCAAATAGGACCTGAGATTGGACTTTTGAGTCACTTACAGACCCTTGTATTGATAAATAACGGGTTCTCTGGAACAATTCCTCCTGAGTTAGGTAATTGTAGTCTTCTAGAAGACATGGAACTTTGTGGAAACAACTTCAGTGGACAAATACCTATGACCTTTAAAAGCTTGCAGAATTTGAAGTCTATCAACCTTTCTTCTAATCAACTCACTGGTCAGATCCCAGAATTCATCACTCAAATCCCTCACCTGCAACTTGTTGACTTGTCCTATAACTATCTCAATGGTTCAGTCCCTTCTGGTATAGGAAACATGAGTGAGCTTTTGGTCCTGTATCTTTATAATAATAGGTTGTCGGGTGAAATTCCTTCCTCAATTGGGAATTGTAGTAAATTGCAAGAATTGTTCTTGAATAATAATAATATTCAGGGAACTCTTCCAGAGACTCTTGACAATCTCTATGATATTGTTTATCTGGACTTTTCTTATAATGATCTTAGGGGTACTATTCCATTGGGTTCTGGAAGTTGTAAAAATTTGTATTTCTTGGATCTGTCATATAATTTATTCAGTGGAGGTATTCCTTCAAGCTTGGGAAATTGTAGTGGCTTAACACAATTTGTTGCAGTTAGCAGTGGCTTAACTGGTACTATTCCATCCTCTATCGGTCTTCTTCGCAAACTTTCCCTTTTATCACTTCCTGTGAATCATTTGTCCGGGAAAATACCCCCGGAGATTGGCAATTGTAAGTCTTTGACACAGTTGTATTTGTATTCCAATCAACTTGAGGGAGAAATTCCCAGTGAGGTGGGAAAGTTGAGTGAATTACAGGATCTTCAGTTGTTTTCCAACCACTTAACCGGCGAAATTCCTCTCAGTGTTTGGAAGATTCAAAGGCTTGAGCATGTCCATGTGTATAATAATAGCCTCTTTGGGGAGCTACCTTTGGAGATGACAGAGCTCAAGAATCTGAAGAATGTCTCATTGTTTAACAACTACTTCTCTGGAGTCATACCTCAAACTTTGGGGATCAAAAGCCATTTGGTACAGTTGGACTTTACGAATAATAAGTTCACTGGTAACATCCCACCAAATCTTTGCTTTGGGAAGAAATTAAATAAACTGATGTTGGGCCTTAATCAGCTTCAAGGTAGCGTACCTCCAGACATAGGAAGGTGTACAACTCTTGAAAGGTTGATTCTCAAAGAAAATAATTTTGCAGGGCCCTTACCTGATTTTGAGTATAATCCAAATCTCACTTTCATGGATATCAGTGGAAACAATATCAATGGCTCAATCCCACCAAGTTTGGGAAACTGCTCAAATGTCACTGATTTGATTTTGTCTAATAACAACTTTGTGGGCCATATGCCCCCTGAGCTAGGTCACCTTGTGAACCTGAGGAATCTTCATCTTGCTCACAACTGCCTCGAAGGTCCTTTACCACCTGAGCTGTCAAAATGTACCAAAATGGATAATTTTGATGTGGGATTCAATTTCCTGAATGGTTCATTTCCTCCAAGTTTGAGGAGCTGGACGGTGCTAACAACATTAAGTCTAAGAGAGAATCAGTTTCACGGAGGCATCCCGGCTTTCTTGTCAGAATTTAGCAGGCTTTCTGAGCTACAGCTTGGTGGAAACATGTTTGGAGGAAAAATTCCAGGGTCAATTGGGGCGTTGCAGAATCTGCTCTATGGGTTGAATCTAAGTGCTAATGGGCTGATTGGTGAAATTCCTCGAGAGATGGGAAAATTAGTGAACCTCCTAAGTTTGGATCTGTCTCAAAACAATTTGAGTGGAAGTATAGGAGTTCTTGCTGAGCTTTATTCATTACTCAAAGTCAATGTTTCATACAATTCCTTTGATGGTCCTGTACCGGAGACACTGATGAAGCTGCTCAATTCTGATCCTTCATCATTTTCAGGAAATCCCGGCCTATGTGTCAGTTGTTCATCATCAAACAGATTGAATTGTAATCAAAGCAGCCATCTAAAGCCATGTGATGATAGATTGAAAAACCAAAAAGGGCTAAGTAAAGTACAAGTAGCAATGATATCACTTGGATCATCAATATTTTTTGGTCTTTTGCTGCTAGGAGTAGTCTATATGTGTGTATGCAGCAGAAAATCTAAGCAAGAAGACGATATCTCTGCCAGAGAAGGCAATTCTTTGCTGCTTAACAAAGTGATGGAGGCTACTGCTAACCTAAGTGACCGGTTCATCATCGGTAGAGGAGCTCATGGAGTAGTTTATAAAGCTTCATTAGATTCAGGCGAAGTTTTTGCTGTGAAGAAGCTTGCATTTTCTGGGAACAAAGGCAAGAGCATGGACAGAGAAATCCAAACCCTTGGAAAGATTAGGCACCGGAATCTGGTCAAACTGGAAGACTTTTGGACGAGAAAAGACTTTGGTCTGATCTTGTACACCTACATGCAAAATGGTAGCCTTCATGAAGTCTTGCACGAAAAGCATCCTCCACCATCTTTAGAGTGGAATGTCCGGTATAAGATAGCCATTGGCGTTGCTCATGGATTGGCCTATCTCCATTATGATTGTGATCCTCCCATAGTACACCGTGACATCAAACCAAAAAACATACTCCTAGATTCTGATATGGAGCCTCACATTGCTGATTTTGGTATCGCCAAGCTTTTGGACCAATCTTCTGCTTCAGCTCCATCTATATCTGTCCCCGGCACAGTCGGGTACATTGCACCAGAGAATGCATACAGAACGGCGAATAATAGAGAATCTGATGTATACAGTTACGGGGTAGTTTTGTTTGAGTTGATGACGAGAAAGATGGCAGTGGATCCTTCATTTATGGAGGGAGTTGATATTGTGAACTGGGTTAGAACTCTGTGGGAAGGAACAGAAGATGTTCATAAAATTGTTGATTCAGGTCTTGCAGTTCAGTTTCTTGATTCAAATGTTCTTGAACAAGCTACTAAAGTGCTTTCAGTGGCTCTGAAATGCACCGAGAAGGATCCACGCTTGAGGCCCACGATGAGAGATGTTGTCAAGCAATTAGAAGATGCTAATCCAAGGACAAGGAGTAAAAAGATTCCAAGTTCCAACTCCTTAATCTGTGGTTGA 3342 0.4105 MRHLWLLLLPLCFYSLLCSVSALSSDGVTLMSLLRHWTSVPHAVKSTWNLSDSTPCSSWVGVQCDHAHNVISLNLTEYGIEGQIGPEIGLLSHLQTLVLINNGFSGTIPPELGNCSLLEDMELCGNNFSGQIPMTFKSLQNLKSINLSSNQLTGQIPEFITQIPHLQLVDLSYNYLNGSVPSGIGNMSELLVLYLYNNRLSGEIPSSIGNCSKLQELFLNNNNIQGTLPETLDNLYDIVYLDFSYNDLRGTIPLGSGSCKNLYFLDLSYNLFSGGIPSSLGNCSGLTQFVAVSSGLTGTIPSSIGLLRKLSLLSLPVNHLSGKIPPEIGNCKSLTQLYLYSNQLEGEIPSEVGKLSELQDLQLFSNHLTGEIPLSVWKIQRLEHVHVYNNSLFGELPLEMTELKNLKNVSLFNNYFSGVIPQTLGIKSHLVQLDFTNNKFTGNIPPNLCFGKKLNKLMLGLNQLQGSVPPDIGRCTTLERLILKENNFAGPLPDFEYNPNLTFMDISGNNINGSIPPSLGNCSNVTDLILSNNNFVGHMPPELGHLVNLRNLHLAHNCLEGPLPPELSKCTKMDNFDVGFNFLNGSFPPSLRSWTVLTTLSLRENQFHGGIPAFLSEFSRLSELQLGGNMFGGKIPGSIGALQNLLYGLNLSANGLIGEIPREMGKLVNLLSLDLSQNNLSGSIGVLAELYSLLKVNVSYNSFDGPVPETLMKLLNSDPSSFSGNPGLCVSCSSSNRLNCNQSSHLKPCDDRLKNQKGLSKVQVAMISLGSSIFFGLLLLGVVYMCVCSRKSKQEDDISAREGNSLLLNKVMEATANLSDRFIIGRGAHGVVYKASLDSGEVFAVKKLAFSGNKGKSMDREIQTLGKIRHRNLVKLEDFWTRKDFGLILYTYMQNGSLHEVLHEKHPPPSLEWNVRYKIAIGVAHGLAYLHYDCDPPIVHRDIKPKNILLDSDMEPHIADFGIAKLLDQSSASAPSISVPGTVGYIAPENAYRTANNRESDVYSYGVVLFELMTRKMAVDPSFMEGVDIVNWVRTLWEGTEDVHKIVDSGLAVQFLDSNVLEQATKVLSVALKCTEKDPRLRPTMRDVVKQLEDANPRTRSKKIPSSNSLICG 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00792 1113 SUPERFAMILY L domain-like 51 289 - -
Accr6g00792 1113 Gene3D Ribonuclease Inhibitor 427 739 IPR032675 -
Accr6g00792 1113 Gene3D Transferase(Phosphotransferase) domain 1 893 1109 - -
Accr6g00792 1113 FunFam Serine/threonine-protein kinase-like protein CCR4 893 1110 - -
Accr6g00792 1113 SUPERFAMILY L domain-like 495 729 - -
Accr6g00792 1113 ProSitePatterns Protein kinases ATP-binding region signature. 824 847 IPR017441 GO:0005524
Accr6g00792 1113 Gene3D Phosphorylase Kinase; domain 1 783 892 - -
Accr6g00792 1113 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 358 1092 - -
Accr6g00792 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Accr6g00792 1113 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 23 179 - -
Accr6g00792 1113 SUPERFAMILY Protein kinase-like (PK-like) 805 1092 IPR011009 -
Accr6g00792 1113 Gene3D Ribonuclease Inhibitor 324 426 IPR032675 -
Accr6g00792 1113 SMART serkin_6 818 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00792 1113 Gene3D Ribonuclease Inhibitor 235 323 IPR032675 -
Accr6g00792 1113 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 304 396 - -
Accr6g00792 1113 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 181 276 - -
Accr6g00792 1113 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Accr6g00792 1113 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 452 738 - -
Accr6g00792 1113 ProSiteProfiles Protein kinase domain profile. 818 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00792 1113 ProSiteProfiles Leucine-rich repeat profile. 669 691 IPR001611 GO:0005515
Accr6g00792 1113 Pfam Leucine rich repeat N-terminal domain 24 65 IPR013210 -
Accr6g00792 1113 SMART LRR_typ_2 667 689 IPR003591 -
Accr6g00792 1113 SMART LRR_typ_2 546 570 IPR003591 -
Accr6g00792 1113 SMART LRR_typ_2 212 234 IPR003591 -
Accr6g00792 1113 SMART LRR_typ_2 331 355 IPR003591 -
Accr6g00792 1113 SMART LRR_typ_2 139 163 IPR003591 -
Accr6g00792 1113 SMART LRR_typ_2 91 115 IPR003591 -
Accr6g00792 1113 SMART LRR_typ_2 187 211 IPR003591 -
Accr6g00792 1113 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Accr6g00792 1113 Pfam Protein kinase domain 823 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00792 1113 Gene3D Ribonuclease Inhibitor 181 234 IPR032675 -
Accr6g00792 1113 MobiDBLite consensus disorder prediction 1094 1113 - -
Accr6g00792 1113 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 784 892 - -
Accr6g00792 1113 SUPERFAMILY L domain-like 296 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00792 Accr-Chr6 15997662 16001216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00792 17 1101 Receptor kinase-like Gene Family AT1G73080 53.497 0.0 1089
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr6g00792 Pkinase 9.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00792 - - gmx:100778035 1458.74