Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00790 ATGAGGCATCTCTGGTTGCCTATTTTTCTTCTTCTTCCTCTATGCTTTTATTCATTGTTATGCTCTGTTTCTGCTTTGAGCTCTGATGGGGTGACCCTAATGTCACTCTTGAGGCACTGGACTTCTGTACCTCATGCTGTGAAGTCCACGTGGAATCTCTCAGATTCCACTCCTTGCTCTTCTTGGGTTGGGGTCCAGTGTGACCATGCTCACAATGTTATCTCCCTTAACCTCACTAAGTATGGGATTGAAGGTCAAATAGGACCTGAGATTGGACTTTTGAGTCACTTACAGACCCTTGTATTGATAAATAACGGGTTCTCTGGAACAATTCCTCCTGAGTTAGGTAATTGTAGTCTTCTAGAAGACTTGGAACTTTGTGGAAACAACTTTAGTGGACAAATACCTATGACCTTTAAAAGCTTGCAGAATTTGAAGTCTATCAACCTTTCTTCTAATCAACTCACTGGTCAGATCCCAGAATTCATCACTCAAATCCCTCACCTGCAACTTGTTGACTTGTCTTATAACCATCTCAATGGTTCCGTCCCTTCTGGTATAGGAAACATGAGTGAGCTTTCGGTCCTGTATCTATTTAATAATACGTTGTCTGCTGAAATTCCTTCCTCAATTGGGAATTGTAGTAAATTGCAAGAATTGTTCTTGAATAATAATAGTATTCAGGGAACTCTTCCCCAGACTCTTAACAATCTCCATGATATTGTTTATCTGGACTTTTCTTATAATGATCTTAGGGGTACTATTCCATTGGGTTCTGGAGGTTGTAAAAATTTGTCTTTCTTGGATCTGTCATATAATTTATTCAGTGGAGGTATTCCTTCAAGCCTGGGAAATTGTAGTGGCTTAACACAACTTGTTGCAGTTAGCAGTGGCTTAACTGGTACTATTCCATCCTCCATCGGTCTTCTTCGCAAACTTTCCCTTTTATGGCTTCCTGTGAATCATTTGTCCGGGAAAATACCCCCGGAGATCGGCAATTGTAAGTCTTTGACACAGTTGCATTTGTTTTCCAATCTACTTGAGGGAGAAATTCCCAGTGAGCTGGGAAAGTTGAGTGAATTACAGGATCTTAGGTTGTATTCCAACCACTTAACCGGTGAAATTCCTCTGAGTGTTTGGAAGATTCAAAGTATTGAGCATATCCTTGTGTATAATAATAACCTCTCTGGGGAGCTACCTTTGCAGATGACAGAGCTCAAGAATCTGAAGAATGTCTCATTGTTCAACAACCACTTCTCTGGAGTCATACCTCAAACTTTGGGGATCAAAAGCCGTTTGGTACAGTTGGACTTTACGAATAATAAGTTCACTGGTAACATCCCACCAAATCTTTGCTTTGTGAAGAACTTAGAAAATCTGATGTTGGGCCTTAATCAGCTTCAAGGTAGCTTACCTCCAGACATAGGAAGGTGTACAACTCTTGAAAGGTTGATTCTCAAAGAAAATAATCTCGCAGGGCCCTTACCTGATTTTGATTATAATCCGAATCTCACTTTCATGGATATCAGTGGAAACAATATCAATGGCTCAATCCCCTCAAGTTTGGGAAACTGCTCAAATGTCACTGATTTAATTTTGTCTAATAACAACTTTGTGGGCCATATACCGCCCGAGCTAGGTCACCTTGTGTACCTGAGGAAGCTTCATCTTGCTCACAACCTCCTCGAAGGTCCTTTGCCACCTGAGCTGTCAAAATGTACTAAAATGGATAGTTTTGATGTGGGATTCAATTTCCTGAATGGTTCATTTCCTCCGAGTTTGAGGAGCTGGACGGTGCTAACAACATTAAGTCTAAGAGAGAATCGGTTTCACGGAGGCATCCCGGATTTCTTGTCAGAATTTTACAGGCTTTCTGAGCTACAGCTTGGTGGAAACATGTTTGGAGGGAAAATTCCAGGGTCAATTGGGGCGTTGCAGAATCTGCGCTATGGGTTGAATCTAAGTGCTAATGGGATGATTGGTGAAATTCCTCAAGAGATGGGAAAATTAGTGAACCTCCAAAGTTTGGATCTGTCTCAAAACAGTTTGACTAGAAGTATAAGAGTTCTTGCTGGGCTTTCTTCATTACTCAAAATCAATGTTTCATACAATTCCTTTGATGGTCCTGTACCGGAGACACTGATGAAGCTGCTCAATTCTGATCCTTCATCATTTTTGGGAAATCCCGGCCTGTGTGTCAGTTGTTCAGCATCAAACATATTGAATTGTAATCAGAGCATCCATCTAAAGCCATGTGATGATAGATTGAAAAACCAAAAAGGGTTAAGTAAAGTACAAGTAGCAATGATATCACTTGGATCATCAATATTTTTTGGTCTTTTGCTGCTGGGAGTAGTCTTTATGTGTGTATGCGGCAGAAAATCTAAGCAAGAAGACGATATCTCTGCCAGAGAAGGCAATTCTTTGCTGCTTAACAAAGTGATGGAGGCTACTGCTAACCTAAGTGACCGGTTCATCATCGGTAGAGGAGCTCATGGAGTAGTTTATAAAGCTTCATTAGATTCAGGCGAAGTTTTTGCTGTGAAGAAGCTTGCATTTTCTGGGAACAAAGGCAAGAGCATGGACAGAGAAATCCAAACCCTTGGAAAGATTAGGCACCGGAATCTGGTCAAACTGGAAGACTTTTGGATGAGAAAAGACTTTGGTCTGATCTTGTACACCTACATGCCAAATGGAAGCCTTCATGAATTCTTGCATGAAAAGCATCCACTGCCATCTTTAGAGTGGAATGTCCGATACAAGATAGCCATTGGCGTTGCTCATGGATTGGCCTATCTCCATTATGATTGTGATCCTCCCATAGTACACCGCGACATCAAACCAAAAAACATACTCCTAGATTCTGATATGGAGCCTCACATTGCTGATTTTGGTATGGCCAAGCTTTTGGACCACTCTTCTGCTTCAGCTCCTTCTATATTTGTCCCCGGCACAGTTGGGTATATTGCACCAGAGCATGCGTACACAACGGCGAATAATAGAGAATCTGATGTATACAGTTACGGGGTAGTTTTGCTTGAGTTGTTAACGAGAAAGATGGCAGTGGATCCTTTATTTATGGAGGGAGTTGATATAGTGAACTGGGTTAGAACTCTGTGGGAAGGAACAGAAGATGTTCATAAAATTGCTGATTCAGGTCTTGCAGTTCAGTTTCTGAATTCAAATATTGTTGGACAAGCCACCAAAGTGCTTTCAGTGGCTCTGAAATGCACCGAGAAGGATTTGCGCGTGAGGCCCACCATGAGAGATGTTGTCAAGCAATTAGAAGATGTTAATCCAAGGACAAGGAGTAAAAAGATTCCAAGTTCCTACTCCTTAATCGATGGTTGA 3351 0.4136 MRHLWLPIFLLLPLCFYSLLCSVSALSSDGVTLMSLLRHWTSVPHAVKSTWNLSDSTPCSSWVGVQCDHAHNVISLNLTKYGIEGQIGPEIGLLSHLQTLVLINNGFSGTIPPELGNCSLLEDLELCGNNFSGQIPMTFKSLQNLKSINLSSNQLTGQIPEFITQIPHLQLVDLSYNHLNGSVPSGIGNMSELSVLYLFNNTLSAEIPSSIGNCSKLQELFLNNNSIQGTLPQTLNNLHDIVYLDFSYNDLRGTIPLGSGGCKNLSFLDLSYNLFSGGIPSSLGNCSGLTQLVAVSSGLTGTIPSSIGLLRKLSLLWLPVNHLSGKIPPEIGNCKSLTQLHLFSNLLEGEIPSELGKLSELQDLRLYSNHLTGEIPLSVWKIQSIEHILVYNNNLSGELPLQMTELKNLKNVSLFNNHFSGVIPQTLGIKSRLVQLDFTNNKFTGNIPPNLCFVKNLENLMLGLNQLQGSLPPDIGRCTTLERLILKENNLAGPLPDFDYNPNLTFMDISGNNINGSIPSSLGNCSNVTDLILSNNNFVGHIPPELGHLVYLRKLHLAHNLLEGPLPPELSKCTKMDSFDVGFNFLNGSFPPSLRSWTVLTTLSLRENRFHGGIPDFLSEFYRLSELQLGGNMFGGKIPGSIGALQNLRYGLNLSANGMIGEIPQEMGKLVNLQSLDLSQNSLTRSIRVLAGLSSLLKINVSYNSFDGPVPETLMKLLNSDPSSFLGNPGLCVSCSASNILNCNQSIHLKPCDDRLKNQKGLSKVQVAMISLGSSIFFGLLLLGVVFMCVCGRKSKQEDDISAREGNSLLLNKVMEATANLSDRFIIGRGAHGVVYKASLDSGEVFAVKKLAFSGNKGKSMDREIQTLGKIRHRNLVKLEDFWMRKDFGLILYTYMPNGSLHEFLHEKHPLPSLEWNVRYKIAIGVAHGLAYLHYDCDPPIVHRDIKPKNILLDSDMEPHIADFGMAKLLDHSSASAPSIFVPGTVGYIAPEHAYTTANNRESDVYSYGVVLLELLTRKMAVDPLFMEGVDIVNWVRTLWEGTEDVHKIADSGLAVQFLNSNIVGQATKVLSVALKCTEKDLRVRPTMRDVVKQLEDVNPRTRSKKIPSSYSLIDG 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00790 1116 SMART serkin_6 821 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00790 1116 SMART LRR_typ_2 358 382 IPR003591 -
Accr6g00790 1116 SMART LRR_typ_2 94 118 IPR003591 -
Accr6g00790 1116 SMART LRR_typ_2 190 214 IPR003591 -
Accr6g00790 1116 SMART LRR_typ_2 142 166 IPR003591 -
Accr6g00790 1116 SMART LRR_typ_2 454 478 IPR003591 -
Accr6g00790 1116 SMART LRR_typ_2 549 573 IPR003591 -
Accr6g00790 1116 SMART LRR_typ_2 670 694 IPR003591 -
Accr6g00790 1116 Gene3D Phosphorylase Kinase; domain 1 788 895 - -
Accr6g00790 1116 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 25 184 - -
Accr6g00790 1116 Pfam Leucine rich repeat 121 179 IPR001611 GO:0005515
Accr6g00790 1116 Pfam Leucine rich repeat 652 705 IPR001611 GO:0005515
Accr6g00790 1116 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 455 740 - -
Accr6g00790 1116 SUPERFAMILY L domain-like 497 732 - -
Accr6g00790 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 361 1095 - -
Accr6g00790 1116 ProSiteProfiles Leucine-rich repeat profile. 672 694 IPR001611 GO:0005515
Accr6g00790 1116 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
Accr6g00790 1116 Gene3D Ribonuclease Inhibitor 31 138 IPR032675 -
Accr6g00790 1116 ProSiteProfiles Protein kinase domain profile. 821 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00790 1116 SUPERFAMILY Protein kinase-like (PK-like) 809 1096 IPR011009 -
Accr6g00790 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Accr6g00790 1116 ProSitePatterns Protein kinases ATP-binding region signature. 827 850 IPR017441 GO:0005524
Accr6g00790 1116 Pfam Protein kinase domain 826 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00790 1116 Gene3D Transferase(Phosphotransferase) domain 1 896 1111 - -
Accr6g00790 1116 FunFam Serine/threonine-protein kinase-like protein CCR4 896 1112 - -
Accr6g00790 1116 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 788 895 - -
Accr6g00790 1116 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 185 279 - -
Accr6g00790 1116 Gene3D Ribonuclease Inhibitor 237 501 IPR032675 -
Accr6g00790 1116 Gene3D Ribonuclease Inhibitor 502 740 IPR032675 -
Accr6g00790 1116 FunFam Predicted protein 302 401 - -
Accr6g00790 1116 Gene3D Ribonuclease Inhibitor 139 236 IPR032675 -
Accr6g00790 1116 SUPERFAMILY RNI-like 230 539 - -
Accr6g00790 1116 SUPERFAMILY L domain-like 29 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00790 Accr-Chr6 15913969 15917483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00790 20 1104 Receptor kinase-like Gene Family AT1G73080 53.134 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr6g00790 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00790 - - gmx:100778035 1421.76