Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00785 ATGAGGCCAGGTCAGTCGCCCCCGGGTCCCGGAGTTCCGAATCGTGACCGTAAGGGTTTTGGCCGTAAACAACTGACCTTGCCGTTGCCGCCGCGTGACCCTTCAAGACCGGTGCCTCTTCCTCTTCCACCGTCCAACTCGGGGGGACCCTCGGGGGGGCCCTCGACGAGTCTCCATGCCGGCCCGATTCACCAGCTCATCCCTTTCACAGAGCTCGAACGCCTCAACCGAATCGGTAGCGGTGCCGGTGGGACTGTCTACAAGGTCGTCCACCGACCCACTGGTCGGGTTTTTGCGCTTAAGGTTATTTACGGCCATCACGAGGACTCCGTGCGCCGACAGATCCTTCGCGAAGTCCAGATCCTTCGGGACGTGGATGACCAGAACGTGGTCAAGTGTTACGATATGTATGATCACAACGCTGAAATCCAAGTGCTTCTTGAGTTCATGGACGGTGGGTCCTTGGAAGGGCAACACATCCCCAACGAGCAGCGCCTTGCAGATCTAGCTCGTCAGATTCTTTGTGGCCTCGCCTACCTTCATCGCCGCCACATCGTTCACAGAGACATCAAGCCATCGAATCTGCTGATTAACTCGCGCAACCAAGTCAAGATTGCAGACTTCGGTGTGGGTCGGATTCTTGCGCAAACCATGGATCCGTGTAATTCATCGGTGGGGACGATCGCTTATATGAGCCCCGAGAGAATCAATACAGACATCAACGACGGACAATACGATGCGTATGCCGGCGATATATGGAGCCTTGGAGTGAGTATACTGGAATTTTACATGGGTAGATTTCCCTTTGCGGTGGGAAGGCAAGGGGATTGGGCCAGTTTGATGTGTGCGATTTGTATGTCTCAGCCGCCGGAGGCGCCTGCTACGGCGTCGCGTGAGTTTAGGGATTTCATATCGCGCTGTTTGCAGAGAGATCCGTCGCGGAGGTGGACGGCGTCGAGATTGTTAGGGCATCCGTTTATAAATCCGGGAATTCGACAACAGAACCCAGTTCATCAGAATCTTCATCAGCTGCTACCTCCTCCTCGCCCGCTTTCTTCCTAG 1062 0.5527 MRPGQSPPGPGVPNRDRKGFGRKQLTLPLPPRDPSRPVPLPLPPSNSGGPSGGPSTSLHAGPIHQLIPFTELERLNRIGSGAGGTVYKVVHRPTGRVFALKVIYGHHEDSVRRQILREVQILRDVDDQNVVKCYDMYDHNAEIQVLLEFMDGGSLEGQHIPNEQRLADLARQILCGLAYLHRRHIVHRDIKPSNLLINSRNQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPATASREFRDFISRCLQRDPSRRWTASRLLGHPFINPGIRQQNPVHQNLHQLLPPPRPLSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00785 353 SMART serkin_6 72 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00785 353 FunFam Dual specificity mitogen-activated protein kinase kinase 57 150 - -
Accr6g00785 353 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Accr6g00785 353 ProSiteProfiles Protein kinase domain profile. 72 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00785 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Accr6g00785 353 MobiDBLite consensus disorder prediction 1 61 - -
Accr6g00785 353 SUPERFAMILY Protein kinase-like (PK-like) 71 347 IPR011009 -
Accr6g00785 353 Gene3D Transferase(Phosphotransferase) domain 1 153 343 - -
Accr6g00785 353 Pfam Protein kinase domain 73 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00785 353 CDD PKc_MAPKK_plant_like 71 328 - -
Accr6g00785 353 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 69 329 - -
Accr6g00785 353 Gene3D Phosphorylase Kinase; domain 1 58 151 - -
Accr6g00785 353 MobiDBLite consensus disorder prediction 30 48 - -
Accr6g00785 353 FunFam Mitogen-activated protein kinase 2 152 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00785 Accr-Chr6 15810375 15811436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00785 1 353 MAP Kinase Kinase Gene Family AT3G21220 70.986 4.02e-167 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Accr6g00785 Pkinase 7.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00785 K13413 - gmx:100786390 507.679