Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00782 ATGGGTTCTGCAGAGGATAAAACAGACCTTGACTCAGATGAGATTGCTTTTAGACCGTCATCATCTTCAAGAAAAGTCCAAACTTTTGATTTTGAGACAGCACATGTACTTTCTCCTGCAAATTTGGCCGGGCCATCCTTCTTCAAGCGACCACAGATCCAACTTTTCAGGAGCATATATATTGTCTTAATTAGAGCAAAGATCAATATGTTACTACCTTTTGGTCCCTTGGCGATATTGCTACATTATCTAACACAAAAGCATGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTGCTCCTTTGGCAGAACGTTTAGGATATGCTACCGAGCAGCTTGCATTGTATACTGGACCAACAGTTGGAGGTCTGCTGAATGCCACATTTGGCAATGCCACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGAGTTGTTCAGCAGTCTCTATTGGGCTCAATTTTATCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGAGGGATTGTTCACCACAATAAGATTCAGCTTTTCAACAAGGCATCAGCTGTTGTAAATTCAGGGTTGCTCTTGATGGCTGTGATGGGAATACTGTTTCCTGCTGTGCTTCACTTTACTCGCTCCGAGGTTCATTTTGGAAAATCAGAGTTATCCCTATCCAGATTTAGTAGCTGTATAATGCTGGTGGCTTATGCAAGCTACCTTTTCTTTCAACTAAGAAGCCAGCATAATCTTTATAACCCTATTGAACAGGAGGATGGTAATAGTGAACATGATGATGAGGATAATAGTGAAAACGATGATGAGGAAGAAGTTGAATTAACTCAATGGGAAGCAATAGCCTGGCTCTCTATTTTGACAGTATGGGTATCTGTATTATCTGGATACCTTGTGGATGCCATAGAGGGGGCATCTGAGTCATTGCATTTGCCTGTGGCTTTTATAAGTGTCATATTGCTTCCAATTGTGGGCAATGCTGCTGAACATGCAAGTGCCATAATGTTTGCCATGAAGGATAAGCTTGATATCTCACTTGGAGTTGCTATTGGATCTTCTACCCAGATATCTATGTTTGTGATCCCTTTCTGCGTTGTTGTTGGGTGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAGCTCTTCGAGACCGCCACGCTCTTTATCACTGTGCTAGTAGTTGCGTTTATGTTGCAGGAAGGGACCTCAAATTATTTTAAAGGCTTGATGCTCATTCTTTGCTACCTCATTGTTGCAGCCAGTTTTTTTGTACATGTAGACCCTACAGAAGATGATAACTGA 1317 0.4077 MGSAEDKTDLDSDEIAFRPSSSSRKVQTFDFETAHVLSPANLAGPSFFKRPQIQLFRSIYIVLIRAKINMLLPFGPLAILLHYLTQKHGWVFFFSLLGIAPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHNKIQLFNKASAVVNSGLLLMAVMGILFPAVLHFTRSEVHFGKSELSLSRFSSCIMLVAYASYLFFQLRSQHNLYNPIEQEDGNSEHDDEDNSENDDEEEVELTQWEAIAWLSILTVWVSVLSGYLVDAIEGASESLHLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTEDDN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00782 438 NCBIfam calcium/proton exchanger 71 428 IPR004798 GO:0006816|GO:0015369
Accr6g00782 438 MobiDBLite consensus disorder prediction 260 276 - -
Accr6g00782 438 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 33 433 IPR004713 GO:0006812|GO:0008324|GO:0016020
Accr6g00782 438 NCBIfam calcium/proton exchanger 62 428 - -
Accr6g00782 438 FunFam Vacuolar cation/proton exchanger 119 258 - -
Accr6g00782 438 MobiDBLite consensus disorder prediction 255 276 - -
Accr6g00782 438 FunFam Vacuolar cation/proton exchanger 273 429 - -
Accr6g00782 438 Gene3D - 119 258 IPR044880 -
Accr6g00782 438 Gene3D - 274 429 IPR044880 -
Accr6g00782 438 Pfam Sodium/calcium exchanger protein 288 425 IPR004837 GO:0016020|GO:0055085
Accr6g00782 438 Pfam Sodium/calcium exchanger protein 90 245 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00782 Accr-Chr6 15751709 15759837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00782 49 437 Antiporters AT1G55730 74.807 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00782 K07300 - rcu:8260832 680.248