Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00781 ATGGCCGCCACAGAGACCTTCGTCAATCCCCAAACCAATTTCATCTTCCGGTCCAAACTTCCCGACATCTACATCCCCAAACACCTCCCTCTTCATTCTTATTGCTTCGAGAATCTTGCAGAGTTCGGGTCCCGCCCTTGCCTGATCAATGCCCCTACCGGCGATATCTACACTTACTACGACGTCGAGCTCACCGCCCGGCGAGTCGCCTCCGGATTGAACAAATTCGGCGTTGGACAGGGTGACGTCATCATGGTCCTCCTCCCTAATTCCCCTGAATTCGTCTTCTCCTTCCTCGGCGCCTCCTTCCGCGGCGCCATGACAACCGCCGCGAACCCCTTCTTCACTGCCGCTGAGGTCGCCAAACAAGCCAAAGCCTCCAAAGCGAAGCTCATCGTAACCCAATCAAACTTCTTCGAGAAAGTGAAGGACATCGACGTGAAGCTAATCTTCGTGGATTCTCCTCCAGACGGACATTCACATTTCTCAGAGCTCTCTCAGGCCGATGAAAAAGATATTCCCGAAGTGGAGATCAATACGGACGACGCCGTCGCATTGCCGTATTCCTCCGGCACCACCGGGTTACCAAAAGGCGTGATGCTAACACACAAGGGATTAGTGACGAGCATAGCACAACAAGTCGACGGAGAGAATCCGAATCTGTATTTTCACCATGAAGATGTGATTCTCTGTGTGCTTCCTCTGTTTCATATATACTCTTTGAACTCTGTTTTGCTGTGTGGATTGAGGGCCAAGGCGGCGATCATGTTGATGCCCAAGTTTGAGATCAATGCGTTGCTGGGGTTGATACAGAAATACAAGGTGTCGATCGCGCCGGTGGTGCCACCGATCGTGCTGGCCATCTCCAAGTCGCCGGATATCGATAAGTATGACCTGTCGTCGGTCAGAGTATTGAAGTCCGGTGGGGCTCCTCTGAGTAAAGAACTTGAGGACTCAGTTAGAGCCAAGTTCCCAAAGGCCAGACTTGGTCAGGGATATGGGATGACTGAGGCAGGACCAGTATTGACAATGAGCTTAGCATTTGCCAAGGAGCCTATGGAAGTGAAGGCAGGAGCATGTGGAACTGTAGTCAGAAATGCTGAAATGAAGATTGTGGACCCTGACACCTCTCACTCTTTGCCACGTGGCCACCCGGGCGAGATCTGTATTAGAGGCGATCAAATCATGAAAGGGTATTTGAATGATCCAGAGGCAACGAAGAGAACTATAGATGAGGAGGGGTGGTTGCATACGGGAGACATAGGTTACATCGATGAGGACGATGAGCTGTTCATCGTTGATAGGCTGAAGGAGCTGATCAAATACAAAGGCTTCCAGGTGGCCCCCGCTGAACTCGAGGCCCTTCTTCTTTCCCATCCTCACATATCCGACGCCGCCGTGGTCCCAATGAAAGATGAAGCAGCAGGAGAGGTGCCCGTAGCTTTTGTCGTGAGATCCAACGGTCACACTCAGACCACCGAGGACGACATCAAACAATTTGTCTCCAAGCAGGTGGTGTTTTACAAGAGAATAAGCAGAGTATTCTTTATTGATGCAATTCCAAAGTCACCATCTGGCAAGATCTTAAGAAAGGATCTCAGAGCAAAACTAGCTGCTGATGCTGCTAATCATTGA 1635 0.5064 MAATETFVNPQTNFIFRSKLPDIYIPKHLPLHSYCFENLAEFGSRPCLINAPTGDIYTYYDVELTARRVASGLNKFGVGQGDVIMVLLPNSPEFVFSFLGASFRGAMTTAANPFFTAAEVAKQAKASKAKLIVTQSNFFEKVKDIDVKLIFVDSPPDGHSHFSELSQADEKDIPEVEINTDDAVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYFHHEDVILCVLPLFHIYSLNSVLLCGLRAKAAIMLMPKFEINALLGLIQKYKVSIAPVVPPIVLAISKSPDIDKYDLSSVRVLKSGGAPLSKELEDSVRAKFPKARLGQGYGMTEAGPVLTMSLAFAKEPMEVKAGACGTVVRNAEMKIVDPDTSHSLPRGHPGEICIRGDQIMKGYLNDPEATKRTIDEEGWLHTGDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPHISDAAVVPMKDEAAGEVPVAFVVRSNGHTQTTEDDIKQFVSKQVVFYKRISRVFFIDAIPKSPSGKILRKDLRAKLAADAANH 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00781 544 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Accr6g00781 544 FunFam 4-coumarate--CoA ligase 2 438 540 - -
Accr6g00781 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 535 - -
Accr6g00781 544 SUPERFAMILY Acetyl-CoA synthetase-like 5 539 - -
Accr6g00781 544 Gene3D - 437 541 IPR045851 -
Accr6g00781 544 Pfam AMP-binding enzyme 38 442 IPR000873 -
Accr6g00781 544 Gene3D - 9 436 IPR042099 -
Accr6g00781 544 CDD 4CL 25 533 - -
Accr6g00781 544 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 437 - -
Accr6g00781 544 Pfam AMP-binding enzyme C-terminal domain 451 527 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00781 Accr-Chr6 15729591 15735156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00781 9 505 Monolignol Biosynthesis Gene Families AT1G51680 69.745 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00781 K01904 - qsa:O6P43_027979 884.404