Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00780 ATGTCCTCCACTGTGTTAGTTGTCATCTTCTTCTTCCTTTCAACTTCATTATCCCTGTATTTTCATGGCGGTGAGGCAGCCGTGGTTATTGTGTCCAAGGATGGGGATGGAGATTTTAGAAGTGTGAGTGAAGCCATAGAGAAAGCTCCTGAGTTCAGTGACGAGCCCTATACCATTCAAGTTCGAAGTGGCACTTACAATGAGTACGTCGTGGTTCGGCCGGAAAAAACCAATATCAAGCTCGTCGGCGAGGGACCAACTCAGACCAGAATAGTTGGCTCCCTCCATGGCACCACCCTAGATGTCCGTGGAGATGGGTTCGTGGCAGAGAACATAGGGCTGCTGAACTCCGCCGGTTTAAAAGCAAGCGCCGCCGTGACGGTTCGCAATGAAGCCAAAAACAGCATTTTCTTTCAATGCTCTATTGAAGGCTTCCAAGACACACTTTGGGCCGTTGCCGGTCGCCAGTTCTACAAGAATTGTGATATCTACGGCACCGTTGACTTCATCTACGGTAATGCTGCCGCCGTCTTCCAGGATTGCAACCTCTATGCTCGCTACCGACCTTACGTCACCTTCACCGCCCAGTCACGTGACAGCCCGGATGAGAACACCGCCTTCGCCTTCCAACATTGCCACTTCACGATGGCCCCAGAGGATGCCGCCATGAAGTCAAAAGTCCGAGCAACATTAGGAAGGCCGTGGCGGCCGTATTCAACGGTGGCCGTGATTGACTCGTTCATTGATTCTATGGTTGACCCCAAGGGATGGGAAGAGATGCAAGGTCAGCCTACCGATAGGGTGACATATGTGGAGTTTAATAATTATGGGCCTGGGTCCAATACATCTGGGAGAGTGAACTGGCCTGGTGTTAGAGTCCTTAATGACCCAAATGAGGCCCAACCTTTCACAGCTTCTGCTCTGTTAGATGCTGACTCTTGGATTCCCGACAAGGGGATTCCTTATAATTGA 972 0.5072 MSSTVLVVIFFFLSTSLSLYFHGGEAAVVIVSKDGDGDFRSVSEAIEKAPEFSDEPYTIQVRSGTYNEYVVVRPEKTNIKLVGEGPTQTRIVGSLHGTTLDVRGDGFVAENIGLLNSAGLKASAAVTVRNEAKNSIFFQCSIEGFQDTLWAVAGRQFYKNCDIYGTVDFIYGNAAAVFQDCNLYARYRPYVTFTAQSRDSPDENTAFAFQHCHFTMAPEDAAMKSKVRATLGRPWRPYSTVAVIDSFIDSMVDPKGWEEMQGQPTDRVTYVEFNNYGPGSNTSGRVNWPGVRVLNDPNEAQPFTASALLDADSWIPDKGIPYN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00780 323 ProSiteProfiles Phosphotyrosine interaction domain (PID) profile. 191 232 IPR006020 -
Accr6g00780 323 FunFam Pectinesterase 4 25 323 - -
Accr6g00780 323 SUPERFAMILY Pectin lyase-like 26 322 IPR011050 -
Accr6g00780 323 PANTHER PECTINESTERASE 28 316 - -
Accr6g00780 323 Pfam Pectinesterase 29 311 IPR000070 GO:0030599|GO:0042545
Accr6g00780 323 Gene3D - 25 323 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00780 Accr-Chr6 15702929 15707072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00780 22 322 Carbohydrate Esterase AT5G49180 37.975 1.02e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00780 K01051 - gmx:102665195 432.18