Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00779 ATGGAGTCATCGTCATCAATGTCCTCCACTGTGTTAGTTGTCATCTTCTTCTTCCTTTCAACTTCATTATCCCTGTATTTTCATGGCGGTGAGGCAGCCGTGGTTATTGTGTCCAAGGATGGGGATGGAGATTTTAGAAGTGTGAGTGAAGCCATAGAGAAAGCTCCTGAGTTCAGTGACGAGCCCTATACCATTCAAGTTCGAAGTGGCACTTACAATGAGTACGTCGTGGTTCGGCCGGAAAAAACCAATATCAAGCTCGTCGGCGAGGGACCAACTCAGACCAGAATAGTTGGCTCCCTCCATGGCACCACCCTAGATGTCCGTGGAGATGGGTTCGTGGCAGAGAACATAGGGCTGCTGAACTCCGCCGGTTTAAAAGCAAGCGCCGCCGTGACGGTTCGCAATGAAGCCAAAAACAGCATTTTCTTTCAATGCTCTATTGAAGGCTTCCAAGACACACTTTGGGCCGTTGCCGGTCGCCAGTTCTACAAGAATTGTGATATCTACGGCACCGTTGACTTCATCTACGGTAATGCTGCCGCCGTCTTCCAGGATTGCAACCTCTATGCTCGCTACCGACCTTACGTCACCTTCACCGCCCAGTCACGTGACAGCCCGGATGAGAACACCGCCTTCGCCTTCCAACATTGCCACTTCACGATGGCCCCAGAGGATGCCGCCATGAAGTCAAAAGTCCGAGCAACATTAGGAAGGCCGTGGCGGCCGTATTCAACGGTGGCCGTGATTGACTCGTTCATTGATTCTATGGTTGACCCCAAGGGATGGGAAGAGATGCAAGGTCAGCCTACCGATAGGGTGACATATGTGGAGTTTAATAATTATGGGCCTGGGTCCAATACATCTGGGAGAGTGAACTGGCCTGGTGTTAGAGTCCTTAATGACCCAAATGAGGCCCAACCTTTCACAGCTTCTGCTCTGTTAGATGCTGACTCTTGGATTCCCGACAAGGGGATTCCTTATAATTGA 990 0.5061 MESSSSMSSTVLVVIFFFLSTSLSLYFHGGEAAVVIVSKDGDGDFRSVSEAIEKAPEFSDEPYTIQVRSGTYNEYVVVRPEKTNIKLVGEGPTQTRIVGSLHGTTLDVRGDGFVAENIGLLNSAGLKASAAVTVRNEAKNSIFFQCSIEGFQDTLWAVAGRQFYKNCDIYGTVDFIYGNAAAVFQDCNLYARYRPYVTFTAQSRDSPDENTAFAFQHCHFTMAPEDAAMKSKVRATLGRPWRPYSTVAVIDSFIDSMVDPKGWEEMQGQPTDRVTYVEFNNYGPGSNTSGRVNWPGVRVLNDPNEAQPFTASALLDADSWIPDKGIPYN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00779 329 PANTHER PECTINESTERASE 33 322 - -
Accr6g00779 329 SUPERFAMILY Pectin lyase-like 32 328 IPR011050 -
Accr6g00779 329 ProSiteProfiles Phosphotyrosine interaction domain (PID) profile. 197 238 IPR006020 -
Accr6g00779 329 FunFam Pectinesterase 4 31 329 - -
Accr6g00779 329 Pfam Pectinesterase 35 317 IPR000070 GO:0030599|GO:0042545
Accr6g00779 329 Gene3D - 31 329 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00779 Accr-Chr6 15702929 15707090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00779 28 328 Carbohydrate Esterase AT5G49180 37.975 4.90e-78 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00779 K01051 - gmx:102665195 432.18