Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00748 ATGGGAATATACCTCAGCGCCCCGAAAACAGAGAAGGCTTCTGATGATGGTGAGAATGACACGCTTTGCTACGGTTTGTCTTCCATGCAGGGATGGCGTGCTACCATGGAAGATGCTCATGCAGCCCATCTAAATTTGGACGAGTCAACATCTTTCTTTGGTGTCTATGATGGTCACGGAGGTAAAGCTGTTGCTAAATTTTGTGCCAAATATCTGCACCGACAGGTGCTTAAGAATGAAGCTTATGCAGCTGGAGATATAGGCACATCTTTGCAGAAAACTTTTCTTAGAATGGATGAAATGATGCTTGGACAAAGAGGGTGGAGAGAATTAGCAGTGTTGGGAGATAATATCGAAAAGTTGTCTGGCATGCTGGAGGGCTTTATTTGGTCTCCTAGGGGTGGTGAAGGCAATGACAATTCTGATGATTGGGTTCTTGAGGAGGGACCGCATTCTGATTTCACTGGACCAAACTCTGGATGCACGGCTTGTGTGGCAGTCATTCGAGGCAACCAAATTGTAGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCTAGGAAGGGACAGGCACATAATTTATCTAAAGACCACAAGCCGGACCTTGAAGTTGAGAGAGATAGGATTTTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAACTTAGCCAGAGCAATCGGAGACATGGAATTTAAGCAAAACAAGTTTTTGCCTGCTGAAAAGCAGATTGTGACCGCTGATCCGGATATAACTTCTGTTGAGCTTTGCGATGATGATGAGTTTCTTGTAATAGCGTGTGACGGGATATGGGATTGCATGTCAAGCCAACAGCTTGTGGATTTTATACATTCCCAGCTGAAGACGGAGGATAAACTCTCTGCAGTTTGCGAGAAAGTATTTGATCGGTGTTTATCACCTACCGCTGGTGGTGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAGGCATTCGACTCCGGATGATTCAATTTCAGACGAGCCTCCATCATCTGGTCAACCATCCGAGGCCGATGAGAGTTCAAATGAACAATCCAACGGGGAAAGAAGTTTAGACCAACCAGTTTAA 1110 0.4468 MGIYLSAPKTEKASDDGENDTLCYGLSSMQGWRATMEDAHAAHLNLDESTSFFGVYDGHGGKAVAKFCAKYLHRQVLKNEAYAAGDIGTSLQKTFLRMDEMMLGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGEGNDNSDDWVLEEGPHSDFTGPNSGCTACVAVIRGNQIVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHSQLKTEDKLSAVCEKVFDRCLSPTAGGEGCDNMTMILVQFKRHSTPDDSISDEPPSSGQPSEADESSNEQSNGERSLDQPV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00748 369 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Accr6g00748 369 PANTHER PROTEIN PHOSPHATASE 2C 18 327 IPR015655 GO:0004722|GO:0006470
Accr6g00748 369 SMART PP2C_4 13 326 IPR001932 -
Accr6g00748 369 MobiDBLite consensus disorder prediction 330 369 - -
Accr6g00748 369 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Accr6g00748 369 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Accr6g00748 369 CDD PP2Cc 24 328 IPR001932 -
Accr6g00748 369 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Accr6g00748 369 Pfam Protein phosphatase 2C 24 102 IPR001932 -
Accr6g00748 369 Gene3D - 1 329 IPR036457 -
Accr6g00748 369 MobiDBLite consensus disorder prediction 338 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00748 Accr-Chr6 15090270 15097744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00748 1 337 PP2C-type Phosphatase Gene Family AT2G25070 76.023 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00748 K17499 - gmx:100499713 627.091