Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00743 ATGAACACTATGGTTTTACTGACTTCCTCTGATCTCAATTTTACTGTGAGGAGGCAACAACCAGAGCTTATAGCTCCAGCAAAGGCTACTCCTCGTGAGTTAAAACTACTGTCTGACTTGGACGACCAAGATAGTTTACGAGCTCATGTTCCACTGGTACACTTCTACCGCCACGAGGCTTCAATGGCGGGGAAGGATCCCGTCAAAGTCATCAGAGATGCATTAGCTCAAACACTAGTATTTTACTATCCATTTGCAGGCAGGATCAGGGAAGGTGTTGGCCACAAACTTGTAGTTGAATGTAATGAAAAAGGCGTTCTCTTTATTGAAGCTGACGCAGATGCATTAGCTCAAACACTAGTATTTTACTATCCATTTGCAGGCAGGATCAGGGAAGGTGTTGGCCGCAAACTTCTAGTTGAATGTAATGAAAAAGGCGTTCTCTTTATTGAAGCTGACGCAGATGTAACCCTTGCTCAGTTTGGTGACAATCTTAAACCTCCATTTCCATGCTTCGATAGCCTCCTTTACAACGTTCCTGGTTCTGAAGGCATTCTTCATTGCCCCCTCTTACTTATCCAGGTCACACGTCTCAAGTGTGGAGGTTTCGTGTTTGCTATGCGCATGAATCACACCATGACCGACGGACCAGGTATTTTGCAGTTCATGAATGTCTTAGATGAAATCGTTAACGGGGCAAGTGAGCCCTCCATTCTTCCTGTTTGGCACAGAGAGATCCTAAGTGCAAGGAACCCGCCACGTGTCACTCGCACCCATCATGAGTTTGAGCAAGTGGCTGGTGCCGCCATTCCATTAAAAGACACAGTCCAACAATCTTTCTTCTTTGGGCCATCTGAGATATCTGCCATTCGTCGGGTAATCCCTCGTCACCTTAGGCAATCTACAACGTTTGAGGTCCTCACAGCATGTCTCTGGCGTTGCCGCACCAAGGCTTTACAGCTGGATCCAAACGACGACGTTCGCACGTTGGTCATCGTAAATACACGTTTTGGCCGAGGGAGGTTTGACCCTCCAATACCTGCTGGTTATTACGGCAATGCTTTTGTGTATCCAGCTGCAGTTACTACTGCGGGAAAACTGTGTGAGAGTCCACTAGGATATGCGTTGGAGTTAGTGAAAAAAGCCAAGGCTAAAGTGGATGAAGAATATGTGCACTCCACGGCTGATCTTTTGGTGACCGGAGGACGACCTTGTTTGACATCAGTGAGATCGTGGATGATATCAGATCTGTCGCGTGTTGTCTTTAGAAATGTTGGTTTTGGGTGGGGCAAGGCTGTGTATGCTGGTCCCGCTAAGGCTGGGTTTGGCCCACTTGCTGGAGTGAGTTTCTTGGTTGCATCCACCAATGATAAGGGAGAGGAGGGCAGAGTTGTGCCTATGTGCTTGCCGCCCGAACCTATGAAGAGATTTGCCAAAGAGTTGGATAACATGCTAGGCAGTTACAAGAATAGTAAAGATTCCAGCATTATCATGTCTGGTCTAACATGTAGTAACTGGCAAAATCATGGGCAATCAGATTAG 1542 0.4676 MNTMVLLTSSDLNFTVRRQQPELIAPAKATPRELKLLSDLDDQDSLRAHVPLVHFYRHEASMAGKDPVKVIRDALAQTLVFYYPFAGRIREGVGHKLVVECNEKGVLFIEADADALAQTLVFYYPFAGRIREGVGRKLLVECNEKGVLFIEADADVTLAQFGDNLKPPFPCFDSLLYNVPGSEGILHCPLLLIQVTRLKCGGFVFAMRMNHTMTDGPGILQFMNVLDEIVNGASEPSILPVWHREILSARNPPRVTRTHHEFEQVAGAAIPLKDTVQQSFFFGPSEISAIRRVIPRHLRQSTTFEVLTACLWRCRTKALQLDPNDDVRTLVIVNTRFGRGRFDPPIPAGYYGNAFVYPAAVTTAGKLCESPLGYALELVKKAKAKVDEEYVHSTADLLVTGGRPCLTSVRSWMISDLSRVVFRNVGFGWGKAVYAGPAKAGFGPLAGVSFLVASTNDKGEEGRVVPMCLPPEPMKRFAKELDNMLGSYKNSKDSSIIMSGLTCSNWQNHGQSD 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00743 513 Gene3D - 263 481 IPR023213 -
Accr6g00743 513 Gene3D - 11 114 IPR023213 -
Accr6g00743 513 Gene3D - 115 262 IPR023213 -
Accr6g00743 513 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 114 - -
Accr6g00743 513 Pfam Transferase family 115 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00743 Accr-Chr6 14727801 14919233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00743 114 481 Monolignol Biosynthesis Gene Families AT5G48930 30.311 8.73e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00743 K19861 - gmx:100797017 556.599