Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00735 ATGTTCAACTCCTGCTATACTAATCCGTACGACCAGAGGGATAAATTTGTGAGGTTGGATTCTAACAGTTCAGTGCCATCCAACCCAAGTGGAGGATTCATGAAGAAGCTCAGATTTAATATAGAAGGTAAGCCGCGTGAAAGGAAGAATGCATCAAAATCCTTTAGGATGGGAATGAAGAGAGGATCAGATGGATTAAAGACATTTGGAAGATCACTGAAAAGTGGAGTCACATGGCAAGTGTTCCCAGAAGATCTTAGAGTGTCAGAGACTAAAATTTTTGATCCTCAGGACAAGACCCTTTTGCTGTGGAACAAGTTTTTTGAGCTTTTGTGTATTATTTCAGTTTCATGTGATCCTCTCTTCTTCTATCTTCCTTACTTCAACCTCAGATCTCACTGCCTTGCAATTGATACTGCACTTGCTTCTACTGCTATCATCCTGAGAACTATACTTGATGTTATCTATCTCATCCGCATCGGTTTCCAATTCCGGACTGCTTATATTGCACCATCCTCTCGGGTTTTCGGGCGAGGCGAACTTGTCATTGATCCAAAAAAGATTGCCAAAAGATACCTTGGACGTTACTTCATTATCGATTTCACTTCTGTGCTGCCATTACCACAGCTTGTGGCCGCTGACTATCTTCGCAAAGCAAAAGGTTTAGAGGTATTAGCCACAAAAACTACGCTATTGAGAGTGGTCATCCTTCAATATATTCCGAGATTTGCGCGCTTCATCCCCTTAGCTACCGAAGTTAAGAAGACAGCTGCTGTTTTTTCTGATAATGCACTCGTGGGGGCCACCTACTATTTGGTCTGGTACATGCTTGTTAGCCATATAGTAGGGTCTGCGTGGTACTTACTAGCTATTGAAAGGAATGACACATGCTGGCAGCAGGCTTGTGCTGCTGCTGCTTCTCAAGGTTGTATTAAACATTTCTTGTACTGTGAGAGTTCGAATAGGCGCCATCCCGGATACGAAGCCTGGAGAAATGTCAATGGGGATATTCTTGACAGGAATTGTGGAGCTGGAGGTAGTGACCCACCATTTGATTATGGAATCTACACTAGAGTTATAGAGAAGGGTATTACAGCCTCCAGTGATATGTGGAGTAAATTCTTTCTATGTTTCTGGTGGGGTCTTCAAAACGTCAGCACACTTGGGCAGGGGCTTGACACCAGTACTTACATTGGGGAGGCTTGTTTTTCCATATTTATATGTATTTTGGGGCTTGTCCTTATGGCACTTCTCATCGGAAAAGTGCAGAACTACCTTCAATCAATTACTGTTCGTCTTGAGGAAATGAGGATCAAGAGGCGTGATTCTGAGCAGTGGATGCATCACCGTGTGCTTCCTCCAGAGCTAAGGGAAAGAGTGAGACGCTATGATCAATACAAGTGGATGGAAACTCGAGGAGTCGACGAAGAGTCCTTAGTGCAGAGTCTTCCAAAAGATCTGAGGAGAGATATCAAACGACATCTTTGCTTGAATTTGGTTAGAAGGGTTCCTCTCTTTGCTAATATGGACGAGCGCTTGCTGGATGCTATCTGTGAGCGTTTGAAGCCTAGTTTGTACACAGATGGAACATACATTGTGAGGGAAGGAGATCCAGTAGTTGAGATGTTCTTCATCATACGCGGTCGTTTAGAGAGTGTGACCACAGATGGAGGAAGAAGTGGGTTCTTCAACAGAGGTCTTCTCAAAGAAGGTGATTTCTGTGGAGAAGAGCTTCTAACATGGGCATTAGACCCTAAATCAGCAGCAAACTTGCCATCATCCACAAGGACAGTGAAAGCTATCAATGAAGTTGAGGCATTTGCTTTAGAAGCAGAGATGTTGAAATTTGTGGCTTCACAGTTCAGGCGCCTCCATAGCAGACAGGTTCAGCAGACTTTCCGGTTCTACTCGCAGCAATGGAGAACATGGGCAGCAACTTTCATTCAGGCTGCGTGGAGACGATGTACCAAAAGGAAGATGATGGAGTCGATGATGACAGAGGAAGGGGAGGGGATGGAGGAATTAGAAGAAGATTATGGTTCTGATGATGATGGAAAAGCCTTGATCTCAAGAACTGAAAGTTCATCATCCACGGCTGGTCTTGGTTCAGCACTTTATGCTTCTCGCTTCGCTGCTAAGGCACTTCATGGTCATAGGGTTCGTTCTCTTAAAAAGCCTCCAGAACCTGACTTTAGTGTTTATGATCATAGAGATTGA 2217 0.4402 MFNSCYTNPYDQRDKFVRLDSNSSVPSNPSGGFMKKLRFNIEGKPRERKNASKSFRMGMKRGSDGLKTFGRSLKSGVTWQVFPEDLRVSETKIFDPQDKTLLLWNKFFELLCIISVSCDPLFFYLPYFNLRSHCLAIDTALASTAIILRTILDVIYLIRIGFQFRTAYIAPSSRVFGRGELVIDPKKIAKRYLGRYFIIDFTSVLPLPQLVAADYLRKAKGLEVLATKTTLLRVVILQYIPRFARFIPLATEVKKTAAVFSDNALVGATYYLVWYMLVSHIVGSAWYLLAIERNDTCWQQACAAAASQGCIKHFLYCESSNRRHPGYEAWRNVNGDILDRNCGAGGSDPPFDYGIYTRVIEKGITASSDMWSKFFLCFWWGLQNVSTLGQGLDTSTYIGEACFSIFICILGLVLMALLIGKVQNYLQSITVRLEEMRIKRRDSEQWMHHRVLPPELRERVRRYDQYKWMETRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTDGTYIVREGDPVVEMFFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKSAANLPSSTRTVKAINEVEAFALEAEMLKFVASQFRRLHSRQVQQTFRFYSQQWRTWAATFIQAAWRRCTKRKMMESMMTEEGEGMEELEEDYGSDDDGKALISRTESSSSTAGLGSALYASRFAAKALHGHRVRSLKKPPEPDFSVYDHRD 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00735 738 FunFam Cyclic nucleotide-gated ion channel 1 503 621 - -
Accr6g00735 738 ProSiteProfiles IQ motif profile. 641 670 IPR000048 GO:0005515
Accr6g00735 738 MobiDBLite consensus disorder prediction 717 738 - -
Accr6g00735 738 SMART cnmp_10 505 636 IPR000595 -
Accr6g00735 738 Gene3D - 110 431 - -
Accr6g00735 738 Gene3D Jelly Rolls 503 623 IPR014710 -
Accr6g00735 738 Gene3D Helix hairpin bin 432 496 - -
Accr6g00735 738 Pfam Ion transport protein 103 432 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr6g00735 738 FunFam Cyclic nucleotide-gated ion channel 1 432 496 - -
Accr6g00735 738 Pfam Cyclic nucleotide-binding domain 526 614 IPR000595 -
Accr6g00735 738 MobiDBLite consensus disorder prediction 676 700 - -
Accr6g00735 738 MobiDBLite consensus disorder prediction 721 738 - -
Accr6g00735 738 CDD CAP_ED 505 636 IPR000595 -
Accr6g00735 738 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 84 731 - -
Accr6g00735 738 ProSiteProfiles cAMP/cGMP binding motif profile. 505 588 IPR000595 -
Accr6g00735 738 SUPERFAMILY cAMP-binding domain-like 435 625 IPR018490 -
Accr6g00735 738 SUPERFAMILY Voltage-gated potassium channels 96 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00735 Accr-Chr6 14602065 14606955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00735 1 731 Ion Channels AT1G15990 64.651 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00735 K05391 - gmx:100810453 1026.16