Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00732 ATGGACAGCAACCAACCAGACAGGACAACCCAGAAAGAGACAGAAACAGAAGATCAACAACAACAACCTTATTCATCATCTTCTTCTTCGCCACCTCGTGCTTGTCTAGATCTAAGTCTCTCTGACTACCACTCCTCATCATCTTCTGAATCTCCCCATGGCGGCAGGATCTTCTCATGCAACTACTGTCATAGAAAGTTCTACAGCTCGCAGGCACTTGGAGGTCACCAGAACGCCCACAAGCGAGAGAGAACTCTTGCAAAAAGACCTCACAACAACACCAACAACAATGTTGGTAATGGTGCTTCTTCTGCTTCACATGTTTCTGCAGATTTTGACCGACTACAGTGTTATTATTATTCATGTATGGCTTCTCTTCCTCTGCATGGCTCCTCCTATAACAGACCACTTGGGATTCAGCTTCATTCCATGATTCGCAAGCCCACCACTTCTTCTTCTTTTCAACCACCTCGTTTCCAGAAGAATATTCCATTATTCCGAGACTCCCATGTTTGGACAGAATTAACTGAATCATCGTCATCTTCTTCTTCTTCTTTATTAACTTCTGGGATTCCAAGGATTCATCCAAGGCCTGTCACAGGGGATCAGCTTCACACACTTGACTTGTCCCTCAAACTGTGA 642 0.4455 MDSNQPDRTTQKETETEDQQQQPYSSSSSSPPRACLDLSLSDYHSSSSSESPHGGRIFSCNYCHRKFYSSQALGGHQNAHKRERTLAKRPHNNTNNNVGNGASSASHVSADFDRLQCYYYSCMASLPLHGSSYNRPLGIQLHSMIRKPTTSSSFQPPRFQKNIPLFRDSHVWTELTESSSSSSSSLLTSGIPRIHPRPVTGDQLHTLDLSLKL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00732 213 MobiDBLite consensus disorder prediction 1 53 - -
Accr6g00732 213 MobiDBLite consensus disorder prediction 73 105 - -
Accr6g00732 213 SUPERFAMILY beta-beta-alpha zinc fingers 54 86 IPR036236 -
Accr6g00732 213 MobiDBLite consensus disorder prediction 1 15 - -
Accr6g00732 213 MobiDBLite consensus disorder prediction 180 199 - -
Accr6g00732 213 Gene3D Classic Zinc Finger 38 113 - -
Accr6g00732 213 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 34 184 IPR044246 GO:0009788
Accr6g00732 213 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Accr6g00732 213 MobiDBLite consensus disorder prediction 90 105 - -
Accr6g00732 213 MobiDBLite consensus disorder prediction 16 53 - -
Accr6g00732 213 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00732 Accr-Chr6 14565597 14566238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00732 56 213 C2H2 Transcription Factor Family AT1G80730 43.503 4.27e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr6g00732 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00732 - - pcin:129287570 215.698