Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00728 ATGGATAATGAGGAAATTCCTTCAGCACCTACAACACCAGGTACTCCTGGTGGACCTCTGTTTGGAGGTTTTAAGTCTGAGAAAAGTAATGGGAATGGCTATGGAAGGAAGAAGTCAATTCTCAATAAGTGTAAGTGTTTCAGTGTTGAAGAATGGAATGTAGAAGAAGGAGTTTTGCCCAGAGTCTCTTGCTCATTGCCTCCCCCTCCTATCCCTCTTGCAAGAAAGGTAGGAGCTGAGTTCATAGGCACTCTGATTCTAATGTTTGCCGGCACAGCCGCTGCTATAGTGAACCAGAAGACACAAGGCGCCGAGACTCTCATCGGCTGCGCCGGCACCACCGGTCTCGCCGTCATGGTCGTCATCCTTTCCACCGGCCACATCTCCGGTGCTCATCTCAACCCCGCCGTCACCATCTCCTTTGCTGCACTAAAGCACTTCCCATGGAAACATGTTCCAGTGTACATTGGAGCACAAATAATGGCGTCAATATGTGCAGCATTTGCACTGAAGGGCATATTTCATCCGTTCATGGATGGAGGAGTCACAGTTCCTTCAGGAGGATATGGTCAAGCCTTTAGTTTGGAGTTCATCATCAGTTTTAACCTCATGTTCGTCGTCACTGCTGTAGCCACCGACACAAGAGCCGTGGGAGAGCTTGCAGGAATCGCAGTGGGGGCCACTGTCATGCTCAACATTCTCATCGCAGGGCCAGCAACAGGAGCATCAATGAACCCAGTGAGAACATTAGGGCCAGCAATAGCAGCAAACAACTACAGAGCCATATGGGTATATCTGATAGCTCCCATACTTGGAGCTCTGAGTGGAGCAGGCACTTACACCTTGGTTAAGCTCAGTGATGAACAAGAAGAAGAAGCCAAGGCTACCACAAGTTCAGCCCCAGGCAGCTTCAGAAGATGA 921 0.4951 MDNEEIPSAPTTPGTPGGPLFGGFKSEKSNGNGYGRKKSILNKCKCFSVEEWNVEEGVLPRVSCSLPPPPIPLARKVGAEFIGTLILMFAGTAAAIVNQKTQGAETLIGCAGTTGLAVMVVILSTGHISGAHLNPAVTISFAALKHFPWKHVPVYIGAQIMASICAAFALKGIFHPFMDGGVTVPSGGYGQAFSLEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNPVRTLGPAIAANNYRAIWVYLIAPILGALSGAGTYTLVKLSDEQEEEAKATTSSAPGSFRR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00728 306 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00728 306 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00728 306 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00728 306 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00728 306 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00728 306 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00728 306 CDD MIP 75 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00728 306 FunFam Aquaporin NIP2-1 63 295 - -
Accr6g00728 306 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Accr6g00728 306 Pfam Major intrinsic protein 74 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00728 306 PANTHER AQUAPORIN NIP2-1 42 289 IPR034294 -
Accr6g00728 306 MobiDBLite consensus disorder prediction 1 25 - -
Accr6g00728 306 SUPERFAMILY Aquaporin-like 72 288 IPR023271 -
Accr6g00728 306 Gene3D Glycerol uptake facilitator protein. 70 298 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00728 Accr-Chr6 14498823 14501434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00728 1 306 Major Intrinsic Protein MIP AT1G80760 75.884 5.00e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00728 K09874 - gmx:100815637 478.018