Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00721 ATGGAGGAGGAAAAGAGACAATCGAGCAGGAGCATCATCTTCAACAAGTATGAGATGGGGAAGCTCCTAGGGCAAGGGAATTTCGCCAAGGTCTACCATGGAAGAAACCTAGAGACCAACGAGAGTGTTGCGATTAAGGTGATTAAGAAGGAGAAGCTTGAGAAGGGGAAGCTGAAGCTGATGAACCAGATCAAGCGTGAAGTGTCTATAATGCGATTGGTTCGACACCCACATATCGTGGAGCTGAAAGAAGTTATGGCCACAAAGGGAAAGATCTTTCTGGTTATGGAGTATGTTAAAGGCGGTGAGCTCTTCGCTAAGGTCACGAAAGGAAAAATGAAGGAAGATTTGGCGAGGAAATATTTCCAGCAATTGATTTCCGCCGTCGATTTCTGTCACAGCCGTGGCGTCACCCACCGGGATCTGAAGCCAGAGAATCTCTTTGTCGACGAAAACGGGGATCTCAGGGTCTCCGACTTCGGGCTTTCCGCGTTGCCGGAGCAGCGCCGGTCTGACGGAATGCTCGTGACACCGTGTGGCACGCCGGCGTATGTGGCGCCGGAGGTCTTGAAGAAGATAGGGTACGATGGATCCAAAGCAGATATCTGGTCCTGTGGGGTAATTCTCTATGCTCTGCTTTCTGGGTATCTTCCATTTCAAGGTGAGAATGTGATGAGAATTTACAAGAAAGCGTTCAAAGCTCAATACGTATTAGCAGATTGGATTTCACCAGAAGCAAAGAATTTAATCTCTAAATTACTAGTGGTGGACCCAGAAAAGAGATATTCGATCGAAGACATAATGAAGGATCCGTGGTTTCAATATGGGTTCATGAGACCGATCGCATTTTCAATGAAGGAACCAAGCTCAGAAGATTTCGAAATCGAAGAAGTGGTAGAAATTGTGGAAGGAGAAAGAGGACAGGGAACCAGTGAAAACAACAAGAATAATAAGCAAGCACAACAATCTCGGCCATTTTACAATGCGTTTGAGATAATTTCGTCCTTGTCACATGGGTTTGACCTGAGGAGCTTGTTTGAGACGAGGAAGAGGTCGCCGTCGATGTTCATGACAAAGTTCTCGCCGGCGGCGGTGGTGGGGAAGCTGGAGGCTGTGGCAAGGGGGCTGAATATGAGGGTGACGGGGAAGAAGGAGTTCATGGTGAAGATGCAGGGGACGAAGGAGGGAAGGAAGGGGAAGCTGGGGATGACGGTGGAGGTGTTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTCACAAAGTCCTCCGGCGACACCTTGGAGTATGTGAAGCTGTGTGAGGAAGACGTGAGACCTGCACTCAAAGACATCGTCTGGAGTTGGCAAGGCGACACCAATCCTCCATCAATAAGCTAA 1377 0.4902 MEEEKRQSSRSIIFNKYEMGKLLGQGNFAKVYHGRNLETNESVAIKVIKKEKLEKGKLKLMNQIKREVSIMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFAKVTKGKMKEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLFVDENGDLRVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKIGYDGSKADIWSCGVILYALLSGYLPFQGENVMRIYKKAFKAQYVLADWISPEAKNLISKLLVVDPEKRYSIEDIMKDPWFQYGFMRPIAFSMKEPSSEDFEIEEVVEIVEGERGQGTSENNKNNKQAQQSRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFMTKFSPAAVVGKLEAVARGLNMRVTGKKEFMVKMQGTKEGRKGKLGMTVEVFEVAPEVAVVEFTKSSGDTLEYVKLCEEDVRPALKDIVWSWQGDTNPPSIS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00721 458 Gene3D Transferase(Phosphotransferase) domain 1 99 277 - -
Accr6g00721 458 ProSiteProfiles NAF domain profile. 322 347 IPR018451 GO:0007165
Accr6g00721 458 SMART serkin_6 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00721 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Accr6g00721 458 CDD CIPK_C 328 442 - -
Accr6g00721 458 Pfam Protein kinase domain 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00721 458 ProSiteProfiles Protein kinase domain profile. 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00721 458 FunFam Non-specific serine/threonine protein kinase 99 280 - -
Accr6g00721 458 FunFam Non-specific serine/threonine protein kinase 322 446 - -
Accr6g00721 458 Gene3D Kinase associated domain 1, KA1 322 447 - -
Accr6g00721 458 FunFam Non-specific serine/threonine protein kinase 8 98 - -
Accr6g00721 458 Gene3D Phosphorylase Kinase; domain 1 8 98 - -
Accr6g00721 458 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Accr6g00721 458 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 442 - -
Accr6g00721 458 Pfam NAF domain 326 381 IPR004041 GO:0007165
Accr6g00721 458 SUPERFAMILY Protein kinase-like (PK-like) 13 274 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00721 Accr-Chr6 14378980 14380356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00721 1 456 CBL-interacting serine-threonine protein kinases AT5G10930 60.526 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr6g00721 Pkinase 2.6e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00721 - - gmx:100797846 669.077