Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00715 ATGTCCCACTGTCCACTCCAAAAAGCTGAGACTGTTTTCTTTTTCCTTTCTTCATGCCTCTCTCATTCTCTTCAACTCTCAACCACCAATTTTCCTTTCTCTCTCTTCTATTGTGATTCCACAAGTCAACCACACTCCATTATATACCCTTCAAGCATTGTTAATGAGGAAATTCCTTCAGCACCTACAACACCAGGTACTCCTGGTGAACCTCTGTTTGGAGGTTTTAAGTCTGAGAAAAGTAATGGGAATGGCTATGGAAGGAAGAAGTCAATTCTCAACAAGTGTAAGTGTTTCAGTGTTGAAGAATGGAATGTAGAAGAAGGAGCTTTGCCCACAGTCTCTTGCTCATTGCCTCCCCCTCCTATCCCTCTAGCAAGAAAGGTAGGAGCTGAGTTCATAGGCACTCTGATTCTAATGTTTGCCGGCACAGCCGCTGCTATAGTGAACCAGAAGACACAAGGCGCCGAGACTCTCATCGGCTGCGCTGGCACCACCGGTCTCGCCGTCATGGTCGTCATCCTTTCCACCGGCCACATCTCCGGTGCTCATCTCAACCCCGCCGTTACCATCTCCTTTGCTGCACTAAAGCACTTCCCATGGAAACATGTTCCAGTGTACATTGGAGCACAAATAATGGCGTCAATATGTGCAGCATTTGCACTGAAGGGCATATTTCATCCGTTCATGGATGGAGGAGTCACAGTTCCTTCAGGAGGATATGGTCAAGCCTTTAGTTTGGAGTTCATTATCAGTTTTAACCTCATGTTCGTCGTCACTGCTGTAGCCACCGACACAAGAGCCGTGGGAGAGCTTGCAGGAATCGCAGTGGGGGCCACTGTCATGCTCAACATTCTCATCGCGGGGCCAGCAATAGGAGCATCAATGAACCCAGTGAGAACATTAGGGCCAGCAATAGCAGCAAACAACTACAGAGCCATATGGGTATATCTGATAGCTCCCATACTTGGAGCTCTGAGTGGAGCAGGCACTTACACCTTGGTTAAGCTCAGTGATGAACAAGAAGAAGAAGCCAAGGCTACCACAAGTTCAGCCCCAGGTAGCTTCAGAAGACGACTCTCTCATGATTCTCAACATATGCCACCCAATAATAATAAAGTGACCAAGAAGAAGAATTACTAG 1143 0.4724 MSHCPLQKAETVFFFLSSCLSHSLQLSTTNFPFSLFYCDSTSQPHSIIYPSSIVNEEIPSAPTTPGTPGEPLFGGFKSEKSNGNGYGRKKSILNKCKCFSVEEWNVEEGALPTVSCSLPPPPIPLARKVGAEFIGTLILMFAGTAAAIVNQKTQGAETLIGCAGTTGLAVMVVILSTGHISGAHLNPAVTISFAALKHFPWKHVPVYIGAQIMASICAAFALKGIFHPFMDGGVTVPSGGYGQAFSLEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPAIGASMNPVRTLGPAIAANNYRAIWVYLIAPILGALSGAGTYTLVKLSDEQEEEAKATTSSAPGSFRRRLSHDSQHMPPNNNKVTKKKNY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00715 380 PRINTS Major intrinsic protein family signature 315 335 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00715 380 PRINTS Major intrinsic protein family signature 166 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00715 380 PRINTS Major intrinsic protein family signature 203 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00715 380 PRINTS Major intrinsic protein family signature 247 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00715 380 PRINTS Major intrinsic protein family signature 278 300 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00715 380 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00715 380 CDD MIP 127 335 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00715 380 MobiDBLite consensus disorder prediction 343 380 - -
Accr6g00715 380 Pfam Major intrinsic protein 126 332 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr6g00715 380 MobiDBLite consensus disorder prediction 365 380 - -
Accr6g00715 380 Gene3D Glycerol uptake facilitator protein. 122 350 IPR023271 -
Accr6g00715 380 PANTHER AQUAPORIN NIP2-1 93 344 IPR034294 -
Accr6g00715 380 SUPERFAMILY Aquaporin-like 124 340 IPR023271 -
Accr6g00715 380 ProSitePatterns MIP family signature. 184 192 IPR022357 -
Accr6g00715 380 FunFam Aquaporin NIP2-1 115 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00715 Accr-Chr6 14068090 14070861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00715 55 358 Major Intrinsic Protein MIP AT1G80760 75.405 2.17e-163 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00715 K09874 - gmx:100815637 486.493