Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00701 ATGGGCGATTTTCTGGCACTAATTTGCCCTAATTCTTCATCCGTATGGAATGGAAAGGGATTCTCAGAGTGTTTTGAAGATATGGTTTTAGGTTTTGGACTGAATGCAGTGACTATTGTTATAATTGTTGTGGTTGGATGCATTCACAAGAGCAGCCGAGAAATTCAAAGATCAGACGCGCAGATGGGCCTTTTGAAGAAGCTTTTCTTGCATGTTATACCAGCTGTTGGAGCATGTGCTTTATTGTTGGACATAATTTTTCTATGGAAGAGAGAAATTAACAGGCACTTTGTTGGATATCATAAGTGGTTTTATAGCTGCTCTGAGTTGATGGTTTGGGCAAATATAATTATCTTCTCAAGGTGTGTCAGCAGTCATCACATGCTCTGCAACAATGTCTTGTGTTACTGGTGGATTCTGAAACCACTATTCTGGATCTTCCATTTGCTTAAAAAGTTCCCATTGTTGGAGACTTCAATATGGGTGGTGGAAAGCTTTATTCTTCTCCTAAATATCACATTTGGCATATCCATCAATGTCATAAGAATAAAGATGTTGTCTCCCAAAAACAGTTCATTTGAAGATCCACTTCTTTCCAATGATAAGGACCTTGAGGAAGGTTGCCATCATGACCTCGGAAAATCTAGGAATTTTTGTGATTCGATGACTTTTAAATTCATAAATCCTGTAATGAACCATGGTGTGGTTAAACAACTGGACTTTGAAGATCTGCTGCAACTACCTTTGGATTTGGATCCTTTGTCCTGCCATGACATAATTTTCACCTGCTGGCAAGCACAACTGAGCAATAATGGTTCAAACCCATCTTTACTTAGAGCAGTATGCTCTGCATATGGATGGCCATATCTCCGCCTGGGTTTATTGAAGGTGGTTAATGATTGTCTTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTGATCCAGTTTCTTCAACAAGGTTCAGAGGGTTTGGATGGATATTTACTTGCTATATCCTTGGGCCTCACATCCGTAATTAAATCCTTCTTAGGTACACAATATACTTTTCATCTTGGGAAGCTGAAGCTAAGGCTACGGTCTAGTATCATGACTCTAATATATCAGAAGTGTCTATGTGTCAACTTAGCAGAGCGTTCAAAATTCTCTAATGGAGAAATTCAGACATTTATGTCTGTGGATGCTGACCGAACTGTCAACATGTGTAATAGTTTCCATGATGTGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTATATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATTACCATTTTGTTGATACCAGTCAATAAATGGATATCAAAATTGATTGCAAATGCAACTGAGAAAATGATGAAGCAGAAGGATGAAAGGATACGGAGGACAGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGCATGCATGGGAACTTCTTTTTTCTGGTTGGCTGATGGAGACAAGATCTTCTGAAGTGAAACACTTAGCTACTCGGAAGTACTTGGATGCATGGTGCGTATTCTTTTGGGCTACAACGCCAACTCTCTTTTCTCTTTTCACATTTGGACTCTATGCATTGATGGGAAACCAACTTGACGCTGCAATGGTTTTTACTTGTCTGGCTTTGTTTAACACATTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATCGATGCCTTTGTATCCTCCAGACGGTTGAGCCGGTTTCTTTCTTGTCCTGAAAATAAATCTAAGGTGAAAGAGACCAATTCATGTTCCTTGCCATTCCATAGTGAACAGCCTGACTCTTTGCAAGGTTTAGCAGTCTCTTTCCAAGATGCATGTTGTACATGGTCAAGCAGTGATGATGAAGCATTAAATTTGGTGTTGAACCATGTAAGTTTAATCCTGCCAAGGGGTTCCTTTGTCGCTGTGATAGGAGAGGTTGGTTCAGGTAAATCATCATTATTATATTCGATTCTTGGAGAAACACGGGTAGCTCATGGATCAATTCACTCTGATGGATCAGTGGCATATGTACCACAGGTCCCATGGATTTTATCTGGAACAATACGTGACAACATAATATTCGGGAAAAGTTATGATCCCAGAAGGTATGCAGAAACGGTTCAAGCATGTGCTCTAGATGTTGATATCTCATTAATGGTTGGAGGCGACATGGCTTACATTGGGGAAAAGGGACTCAACTTATCTGGTGGACAGAGAACTCGTCTTGCTTTAGCCAGGGCACTGTATCATGGATCTGATGTGATTATGCTTGATGATGTCCTGAGTACAGTTGATGCACAAGTTGCTCGTTGGATCTTACACAATGCCATTCTAGGTCCTCTTGTGCAGGGAAAAACTCGATTTCTCTGTACCCATAATATACAGGCAATATCCTCTGCTGAGATGGTTGTTATAATGGACAAAGGACAAATAAAGTGGGTGGGAAGTCCTAATGACCACCAAGTCTCTTCATATATAACATTCTCCCCATTGAATGAACTTGATTCGGATGTACAGAATCAAGGAAAATCTTGCTGCACAAATTCTTCTTCCAAATTAAAAGAGCTCCAAGATAGAGAAATTAACCATGTTGTGGAGGGAGCAGAGGAGGTCATTGAAGCTGAGTTGAGGAAAGAGGGAAAAGTAGAACTAGGAGTGTATAAGAACTATGCTATGTTTACTGGCTGGTTCATTACAGTTGTAATATGCCTGTCAGCTCTTCTTATGCAAGCTTCTCGTAATGGAAATGATTTATGGCTGTCATTTTGGGTCGATACAGCAGAAAGCAGTCAAACAAGATACTCTTTGTCCTTTTATTTGGCTATATTGGGTCTCTTCTGCATCATAAATTCTTTTCTCACATTGGTGAGGGCGTTTTCTTTTGCATTTGGTGGCTTACAAGCAGCAATTAAAGTGCACAACAGAATGCTTGGTAACCTTATCAATGCTCCTGTGCAATTCTTTGATCTAACGCCAGGTGGAAGAATACTCAACAGGTTTTCCTCCGATCTTTATACAATTGATGACTCCCTTCCATTCATTATGAACATTCTCCTAGCTAATTTTGTTGGCCTCCTGGGCATTGCAGTAGTTTTGTTATACGTTCAGGTCTTTTTCTTAATCCTGCTGTTGCCATTTTGGTATATCTACAGTAGGCTCCAGTTCTTCTACAGGTCAACATCAAGAGAACTACGACGACTTGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACTGAAACACTTGACGGATCATCAACTATTAGGGCATTTAAATCTGAGGACTTATTTTTTGCCAAGTTCACTGAACTTGTAACAATGTATCAGAAGACTTCTTACACGGAGATAGCAGCCAGTTTATGGCTTTCCTTACGTCTTCAGTTATTAGCTGCTTTTGTCATCTCATTTATTGCACTGATGGCTGTGGTTGGAAATCATGGCAATCTGCCAGTCCACTTTGGCACCCCTGGGCTGGTAGGATTGGCACTCTCATATGCGGCTCCGATAGTGTCCTTGTTGGGAAGCTTTCTAACAAGTTTCACTGAAACAGAAAAGGAAATGGTTTCGGTTGAAAGAGTCCTTGAATACATGGACATTCCTCAAGAAGAAATTGCCGGATGCCTTTGCATGAACCCAGATTGGCCATGTCAAGGAGTAATTGAGTTCCAAAATGTTACCTTAAAATACAAGCCATCTTTGCCTCCTGCACTCTGCAATCTTAGTTTTACAATTGCTGGAGGGGCCCAGATTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTGAATGCTCTTTTCCGCCTTACCCCGATATGTACTGGCTCTATTTTCATTGATGGTATAAACATTAACAACATTCCTGTCAGAGACCTACGTTCTCGTTTGGCTGTTGTTCCTCAGAGTCCATTCCTGTTTGAAGGATCACTAAGGGATAATTTAGATCCCTTCCAAATGCATGATGACTTGAAGATTTGGAATGCTTTGGAGAAGTGTCATGTGAAAGAGGAAGTAGAAGCAGCCGGAGGGCTACATATTCTCGTAAAGGAATCTGGCATGTCATTTTCAGTTGGCCAAAGGCAGCTTCTTTGCCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAATGTACAGCCAACGTGGACACACAAACTGCTTCACTCCTTCAAAGTACCATATCTAATGAGTTCAAGGGCATAACATTAATCACAATCGCTCACAGGATCTCCACAGTTTTGAATATGGACAGCATTTTAATTCTTGACCATGGGAAGCTGGCTGAACAAGGAAACCCACAGGTTCTTCTGAAACGTGACTCCTTATTCTCCAGTTTTGCTCAAGCTTCATCAATGTAA 4395 0.4059 MGDFLALICPNSSSVWNGKGFSECFEDMVLGFGLNAVTIVIIVVVGCIHKSSREIQRSDAQMGLLKKLFLHVIPAVGACALLLDIIFLWKREINRHFVGYHKWFYSCSELMVWANIIIFSRCVSSHHMLCNNVLCYWWILKPLFWIFHLLKKFPLLETSIWVVESFILLLNITFGISINVIRIKMLSPKNSSFEDPLLSNDKDLEEGCHHDLGKSRNFCDSMTFKFINPVMNHGVVKQLDFEDLLQLPLDLDPLSCHDIIFTCWQAQLSNNGSNPSLLRAVCSAYGWPYLRLGLLKVVNDCLGFAGPLLLNKLIQFLQQGSEGLDGYLLAISLGLTSVIKSFLGTQYTFHLGKLKLRLRSSIMTLIYQKCLCVNLAERSKFSNGEIQTFMSVDADRTVNMCNSFHDVWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIANATEKMMKQKDERIRRTGELLTYIRTLKMHAWELLFSGWLMETRSSEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGNQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFVSSRRLSRFLSCPENKSKVKETNSCSLPFHSEQPDSLQGLAVSFQDACCTWSSSDDEALNLVLNHVSLILPRGSFVAVIGEVGSGKSSLLYSILGETRVAHGSIHSDGSVAYVPQVPWILSGTIRDNIIFGKSYDPRRYAETVQACALDVDISLMVGGDMAYIGEKGLNLSGGQRTRLALARALYHGSDVIMLDDVLSTVDAQVARWILHNAILGPLVQGKTRFLCTHNIQAISSAEMVVIMDKGQIKWVGSPNDHQVSSYITFSPLNELDSDVQNQGKSCCTNSSSKLKELQDREINHVVEGAEEVIEAELRKEGKVELGVYKNYAMFTGWFITVVICLSALLMQASRNGNDLWLSFWVDTAESSQTRYSLSFYLAILGLFCIINSFLTLVRAFSFAFGGLQAAIKVHNRMLGNLINAPVQFFDLTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAVVLLYVQVFFLILLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDLFFAKFTELVTMYQKTSYTEIAASLWLSLRLQLLAAFVISFIALMAVVGNHGNLPVHFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERVLEYMDIPQEEIAGCLCMNPDWPCQGVIEFQNVTLKYKPSLPPALCNLSFTIAGGAQIGIIGRTGAGKSSVLNALFRLTPICTGSIFIDGININNIPVRDLRSRLAVVPQSPFLFEGSLRDNLDPFQMHDDLKIWNALEKCHVKEEVEAAGGLHILVKESGMSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTISNEFKGITLITIAHRISTVLNMDSILILDHGKLAEQGNPQVLLKRDSLFSSFAQASSM 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00701 1464 CDD ABCC_MRP_domain1 613 817 - -
Accr6g00701 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1228 1461 IPR003439 GO:0005524
Accr6g00701 1464 CDD ABC_6TM_MRP7_D2_like 906 1205 - -
Accr6g00701 1464 FunFam ATP-binding cassette subfamily C member 10 269 586 - -
Accr6g00701 1464 CDD ABCC_MRP_domain2 1226 1445 - -
Accr6g00701 1464 Gene3D ABC transporter type 1, transmembrane domain 872 1211 IPR036640 GO:0005524|GO:0016020
Accr6g00701 1464 Gene3D ABC transporter type 1, transmembrane domain 266 586 IPR036640 GO:0005524|GO:0016020
Accr6g00701 1464 Pfam ABC transporter 1246 1392 IPR003439 GO:0005524
Accr6g00701 1464 ProSitePatterns ABC transporters family signature. 1364 1378 IPR017871 GO:0005524|GO:0016887
Accr6g00701 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 907 1193 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr6g00701 1464 Pfam ABC transporter transmembrane region 293 557 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr6g00701 1464 Pfam ABC transporter transmembrane region 908 1153 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr6g00701 1464 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 215 1461 - -
Accr6g00701 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 840 IPR003439 GO:0005524
Accr6g00701 1464 SMART AAA_5 643 817 IPR003593 GO:0016887
Accr6g00701 1464 SMART AAA_5 1254 1444 IPR003593 GO:0016887
Accr6g00701 1464 CDD ABC_6TM_MRP7_D1_like 292 577 - -
Accr6g00701 1464 SUPERFAMILY ABC transporter transmembrane region 278 577 IPR036640 GO:0005524|GO:0016020
Accr6g00701 1464 SUPERFAMILY ABC transporter transmembrane region 903 1210 IPR036640 GO:0005524|GO:0016020
Accr6g00701 1464 FunFam ABC transporter C family member 5 872 1211 - -
Accr6g00701 1464 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Accr6g00701 1464 Pfam ABC transporter 634 766 IPR003439 GO:0005524
Accr6g00701 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1222 1460 IPR027417 -
Accr6g00701 1464 Gene3D - 587 851 IPR027417 -
Accr6g00701 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 294 569 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr6g00701 1464 FunFam ATP-binding cassette (ABC) transporter, putative 1215 1461 - -
Accr6g00701 1464 Gene3D - 1215 1459 IPR027417 -
Accr6g00701 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 826 IPR027417 -
Accr6g00701 1464 FunFam ABC transporter C family member 13 594 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00701 Accr-Chr6 13518933 13536535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00701 585 862 Calmodulin-binding Proteins AT2G36910 27.027 6.40e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00701 K05674 - gmx:100814181 2284.6