Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00696 ATGGGAAGACCCCAGCAACGGTATCGCGGAGTACGGCAGAGACACTGGGGCTCATGGGTCTCCGAGATTCGTCACCCCATCTTGAAGACGAGAATATGGGTGGGGACATTTGAAACAGCAGAAGATGCAGCAAGAGCCTATGATGAAGCAGCCATACTCATGTGTGGTCCTCAAGCCACCACCAACTTCCCCTTCAACCCTAATCTCTCTCCTTCTTCCTCTTCTTCCCTTCTCTCTCCTACTCTCACAACCAAGCTTCTTCAAATGAAGAAAAAAGCTCATCATCATCATCACCAACAACAACATAAACAAACCTCTCTCACCACTCATCCTTCCGCCGGCAATGCTGTCACCATACCAAGCTCTGAGACTGGGTCCTGGTCCCCGGAGGGACCACCCTTTCAGCTGCAAGTGCTTGAGGATGATCACATTGAGCAGATGATTCAAGAGCTACTTCACTACGGTTCCATTGAGCTTTCTGCTCCTTAA 489 0.499 MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWVGTFETAEDAARAYDEAAILMCGPQATTNFPFNPNLSPSSSSSLLSPTLTTKLLQMKKKAHHHHHQQQHKQTSLTTHPSAGNAVTIPSSETGSWSPEGPPFQLQVLEDDHIEQMIQELLHYGSIELSAP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00696 162 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Accr6g00696 162 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Accr6g00696 162 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Accr6g00696 162 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Accr6g00696 162 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Accr6g00696 162 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Accr6g00696 162 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Accr6g00696 162 MobiDBLite consensus disorder prediction 104 131 - -
Accr6g00696 162 MobiDBLite consensus disorder prediction 89 103 - -
Accr6g00696 162 MobiDBLite consensus disorder prediction 89 134 - -
Accr6g00696 162 FunFam Ethylene-responsive transcription factor 2 6 66 - -
Accr6g00696 162 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 104 - -
Accr6g00696 162 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00696 Accr-Chr6 13403312 13404128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00696 1 161 AP2-EREBP Transcription Factor Family AT5G25190 56.000 7.15e-61 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr6g00696 AP2 2.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00696 - - jre:108983748 160.229