Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00692 ATGGATAAGGACGATTTTTTCAATGAACTCATATTCATTGACTCAATTTCTGAGGAGGACCTCTTTATTAGGGAGATCCTTCACCAACCTTGTTTCTCTTCCGTGAGTGACATTATCAACACCATCACCACCGCTGATACTAGTGGTGCTGCCGTGACAACCACCACTGTCAGTAGCTTATCCTCCAGCGCCAGTCAATCCAAACATGACAGCCCCAGTTCGGGACATGCTAGTTTCTGCGACAAACCGGCAACCTCATCTTCTCAGGCAACATATATTCTATCTTTCGATAGCTCAACTATAATACCGGCGACAACCGATGATAACGCCAGTTATGAGAAACATGAACCTGAAAACACGCGTGCTTCTTCGCTAAAACGGACTCCGGAAAACAATGGCAGTGAGTCAAAGGCCCATCAAAAGAAAAGGAAGATTAGAAATTCATCTGAGACATTGGAACACATAATGTCTGAGAGAAAAAGGAGACAACAACTCTCTGAGAAGTTTATTGCCCTCTCAGCTACAATTCCAGGTTTGAAGAAGATCGACAAGTCGTCTGTACTAAGCGAAGCTATCAATTACATGAAGAAACTTAAAGAACGAGTGAGAGAGTTAGAGGAACAGAACAAGAAGATAAGAGACGAAGGCGAGTCATTATTATTAATGTCAAGCATAAATAAATCACCATGCCACCACCTCAACGCTAAGGATAATGATCATAATCATCAGCATCATCACCAAGACACAATATCTTCTTCTGAAACAATGAGCTCTAATGACAATTGCTTCAGAATAATCAACGAAGCATTGCCTGAGGTTGAAGCAAGAGTGTTGCACAAACAAATTCTCATCAGGATCCTCTGTGAGAAGCATGAAAGTGTGATGCTTACTATATTCGCCCAACTCAAAAGCCTCCATTTTTCTATTATCAACTCTAGCGTCTTAAATTTTGCCAATTCCGCTCTTGACATCACCATTATAGCTGAGGTTGAGGAACACAAAATTGCTGTGAAGGAAGTTGTGAAAAAGCTTCGATTGGCCCTGTTGGAGACGTATCACAACCAATAA 1068 0.4148 MDKDDFFNELIFIDSISEEDLFIREILHQPCFSSVSDIINTITTADTSGAAVTTTTVSSLSSSASQSKHDSPSSGHASFCDKPATSSSQATYILSFDSSTIIPATTDDNASYEKHEPENTRASSLKRTPENNGSESKAHQKKRKIRNSSETLEHIMSERKRRQQLSEKFIALSATIPGLKKIDKSSVLSEAINYMKKLKERVRELEEQNKKIRDEGESLLLMSSINKSPCHHLNAKDNDHNHQHHHQDTISSSETMSSNDNCFRIINEALPEVEARVLHKQILIRILCEKHESVMLTIFAQLKSLHFSIINSSVLNFANSALDITIIAEVEEHKIAVKEVVKKLRLALLETYHNQ 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00692 355 Pfam Helix-loop-helix DNA-binding domain 153 198 IPR011598 GO:0046983
Accr6g00692 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
Accr6g00692 355 MobiDBLite consensus disorder prediction 236 256 - -
Accr6g00692 355 MobiDBLite consensus disorder prediction 109 123 - -
Accr6g00692 355 MobiDBLite consensus disorder prediction 105 151 - -
Accr6g00692 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 220 IPR036638 GO:0046983
Accr6g00692 355 PANTHER BHLH TRANSCRIPTION FACTOR 25 351 - -
Accr6g00692 355 Gene3D - 149 222 IPR036638 GO:0046983
Accr6g00692 355 MobiDBLite consensus disorder prediction 62 82 - -
Accr6g00692 355 Coils Coil 188 222 - -
Accr6g00692 355 SMART finulus 155 204 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00692 Accr-Chr6 13264448 13267434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00692 146 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.647 3.51e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr6g00692 HLH 2.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00692 - - pcin:129289282 301.597