Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00691 ATGGATCATAAGGACGATTTTTTAAATGAACTCAGCCTCTATGACTCAATTTATGAGGAGGACTTCCTCCTTAGGGAGATCCTTCACCAACCTTGTTTTTCTTCCGTAAGTGACATTATGAACACCATCACCGCGGCTGATACTGGTGGTGCCGCCGTAACAACCACCACTGTCAGTAGCTTATCCTTAGGCGACAGCCAATCCAAACATGACAGCCCCAGTTCGGGACATGCTAGTTTCTGCGACAAACCGGAAACCACATCTCAGCCAACTTATATTCTATCTTTTGGTAACTCAATGGTAATACCGGCGACCGCAGATGACTCCGGCGGTTATGAGAATCATGAAGCTGCAAACACGCGTGCTTCTTCGCTAAAACGGAAACCAGAAAACAATGAGAGGGAGTCAAAGGCCCATCAAAAGACGAAGAAGAGTAGAAGTTCATCTGAGACATTGAATCACATAATGTCTGAGAGAAAAAGGAGACAAGAACTCTCTCAGAAGTTTATTGCACTTTCGGCTACAATTCCTGGTTTGAAGAAGATTGACAAGTCAACTGTTCTAAGCGAAGCGATCGATTACGTGAAGAAACTTAAAGAACGGGTGAGAGAGTTAGAGGAACTGAACAAGAAGATAAGAGACGATAGGGAGTCATCATTAATATCAAGCTTAAACAGATCACCATGCCACCACCTCAATGCTAAGGATAATGATCATCATCATCATCAAGACACAATATCTTCTTCTGAAACAAAGAGTACCTCTGATGATAAGTGCTTCAAAATAATCAACAAAGGATTGCCTGAGATTGAAGCAAGAGCGTTACACAACCAAATTCTCATCAGAATCCACTGTGAGAAGCACAACACTGTGATGCTTACTATATTCGCCCAACTGAAGCGCTTCCATCTCTCCATTATCAGCTCTAGCGTTTTAAACTTCGCCAATTCCGCTCTTGACATCACCATTTTAACTGAGGTTGATGTACACAAAATAGAAGTGAAGGAAGTTGTGAAAAAGCTTCGATTGGCCATGTTGGAGACCTATCACAACCAATAA 1059 0.423 MDHKDDFLNELSLYDSIYEEDFLLREILHQPCFSSVSDIMNTITAADTGGAAVTTTTVSSLSLGDSQSKHDSPSSGHASFCDKPETTSQPTYILSFGNSMVIPATADDSGGYENHEAANTRASSLKRKPENNERESKAHQKTKKSRSSSETLNHIMSERKRRQELSQKFIALSATIPGLKKIDKSTVLSEAIDYVKKLKERVRELEELNKKIRDDRESSLISSLNRSPCHHLNAKDNDHHHHQDTISSSETKSTSDDKCFKIINKGLPEIEARALHNQILIRIHCEKHNTVMLTIFAQLKRFHLSIISSSVLNFANSALDITILTEVDVHKIEVKEVVKKLRLAMLETYHNQ 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00691 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
Accr6g00691 352 SMART finulus 155 204 IPR011598 GO:0046983
Accr6g00691 352 Coils Coil 188 218 - -
Accr6g00691 352 Gene3D - 141 220 IPR036638 GO:0046983
Accr6g00691 352 PANTHER BHLH TRANSCRIPTION FACTOR 56 347 - -
Accr6g00691 352 MobiDBLite consensus disorder prediction 62 84 - -
Accr6g00691 352 MobiDBLite consensus disorder prediction 120 152 - -
Accr6g00691 352 MobiDBLite consensus disorder prediction 227 253 - -
Accr6g00691 352 MobiDBLite consensus disorder prediction 107 152 - -
Accr6g00691 352 MobiDBLite consensus disorder prediction 231 247 - -
Accr6g00691 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 212 IPR036638 GO:0046983
Accr6g00691 352 Pfam Helix-loop-helix DNA-binding domain 153 198 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00691 Accr-Chr6 13225806 13228560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00691 93 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 34.630 1.39e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr6g00691 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00691 - - pcin:129289282 260.381