Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00690 ATGGATAAGGACGATTTTTTAAATGAACTCAGCCTCAATGACTTAATTTATGAGGAGGAGGAGGACCTCCTTATTAGGGAGATCCTTCAAGAACCATGTTACTCTTCCGTCAGTGACATTATCAAGAACATCACCACCGCTGATACTGGTGGTGCCACCGCAACAACCACCACTGTCAGTAGCTTATCCTTGGACGACTTAGGCGGCAGTACATCCAAGCATAACAGCCCTAGTTCGGGACTTGCTAGTTTCTGCGACAAACCTCCAACCTCATCTTCTCAGTCAACTTATATTCTATCTTTTGATAACTCAAATATGATACCGGCGACCACCGATGATAACGCCGGCTATGAGAAACATGAAGCTTCAAACACGCGTGTTTCTTCGCTAAAACGGACTCCGGAAAACAATGGCAGTGAGTTAAAGGCCCATCAAAAGACAAGGAAGAGTAGAAGTACATCTGAGACATTGGATCACATAATGTCTGAGAGGAAAAGGAGACAAGAACTCTCTGAGAAATTTATTGCACTTTCAGCTACAATTCCTGGTTTGAAGAAGATTGACAAGTCATCTGTATTAAGCGAAGCTATCAATTACATGAAAAGACTTAAAGAACGAGTGAGTGAGTTAGAGGAAGAGAACAAGAAGACAAGAGATGATAGCGAGTCATTATTATTAATGTCAAGCATAAATAAATCATCATGCCACCACCTCAATGCTAAGGATAAAGATCATCATCGTCAGCATCATCATCAAGACACAATATCTTCTTCTGAAACAATGAGTACCTCTGATGATAAATGCTTCAGAATAATCAACGAAGCATTGCCTGAGGTTGAAGCAAGAGTGTTGCACAACCAAGTTCTGATAAGAATCCACTGTGAGAAGCACAAAAATGTGATGCAAACTATATTGGCCCAACTCAACAACCTCCATCTCTCCATTGTCAACTCTAGCGTCTTGAACTTTGCCAATTACGCTCTTGATATCACCATTATAGCTGAGGTTGAGGAACACAAAGTAGAAGTGAAGGAAGTTGTGAAAATGCTTCGATTGGCTCTGTTGGAGACCTCTCACATCCAATGA 1086 0.4125 MDKDDFLNELSLNDLIYEEEEDLLIREILQEPCYSSVSDIIKNITTADTGGATATTTTVSSLSLDDLGGSTSKHNSPSSGLASFCDKPPTSSSQSTYILSFDNSNMIPATTDDNAGYEKHEASNTRVSSLKRTPENNGSELKAHQKTRKSRSTSETLDHIMSERKRRQELSEKFIALSATIPGLKKIDKSSVLSEAINYMKRLKERVSELEEENKKTRDDSESLLLMSSINKSSCHHLNAKDKDHHRQHHHQDTISSSETMSTSDDKCFRIINEALPEVEARVLHNQVLIRIHCEKHKNVMQTILAQLNNLHLSIVNSSVLNFANYALDITIIAEVEEHKVEVKEVVKMLRLALLETSHIQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00690 361 MobiDBLite consensus disorder prediction 109 167 - -
Accr6g00690 361 Pfam Helix-loop-helix DNA-binding domain 159 203 IPR011598 GO:0046983
Accr6g00690 361 Gene3D - 143 225 IPR036638 GO:0046983
Accr6g00690 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 222 IPR036638 GO:0046983
Accr6g00690 361 Coils Coil 193 227 - -
Accr6g00690 361 MobiDBLite consensus disorder prediction 137 167 - -
Accr6g00690 361 SMART finulus 160 209 IPR011598 GO:0046983
Accr6g00690 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Accr6g00690 361 MobiDBLite consensus disorder prediction 66 87 - -
Accr6g00690 361 PANTHER BHLH TRANSCRIPTION FACTOR 57 356 - -
Accr6g00690 361 MobiDBLite consensus disorder prediction 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00690 Accr-Chr6 13149681 13153522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00690 76 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.919 2.27e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr6g00690 HLH 6.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00690 - - pcin:129289587 281.567