Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00687 ATGAAAAATTTTCTTGTTTTGTTCCTGCTCATTTGGGTATCAAGCTTTTCGCCTTCAGTTTCTCATTTTTTTGCAAATGCTGAAGCTGAATCTCCAGGTGCTGCGGAGGCTAGAGTAGGGCACCACCAGAATTTAAACAATAGAATTATAATAGCACTTGCTGTTTGTTCTGCTCTTCTGGTCTCAATCTTCCTATTTTTAACATACATCTGGTGTTATCGACACAAAATCTTCAAAGTTCCCAGTTCTAAAAGCCCTGAGACCATAGAAGCTGCAAAAGGGGTGTCACTTAGCCCTGTTGATGCTAAATTTAATTACTCAAAAATGGCAGACAAGAAGAGTTCAATTGCTATATTTGACTTTCAGTTGTTAGAGGTTGCAACAAACAGCTTTGCCAAAAGTAACATTCTGGGTGAAAGTCGTTCTAGGCTAATGTACAGCGCTTGTTTTGATGAGCATCTCAAGGCAGCTGTGAAGAAAGCAGATAGCAGTGCTGATAGGGAATTTGAGAATGAAGTGAATTGGTTAAGCAAGATTCGGCATCAGAATATCATCAAACTTCTTGGATACTGTATTCATGGTGAATCAAGGTTTCTTGTATATGAAATGGTGGAGAATGGATCTTTGGAAACTCAATTACACGGGCCTAGTCATGGATCATCTTTAAATTGGGACCTCCGCCTAAAGATCGCTGTTGATGTTGCCAGGGCATTAGAATATCTCCATGAGCACTCTAATCCTCCTATGGTACATAGAGACCTAAAATCTTCTAATGTTCTTCTGGATTCTCACTTTAATGCCAAGCTATCAGATTTTGGGCTTGCTGTAAGTTCTGGAATGCAAGACAAGAACATAAAGATGTCAGGAACCTTGGGTTATGTAGCACCTGAGTACATATCACATGGTAAGCTAACTGATAAAAGTGATGTATATGCTTTTGGGGTTGTCCTTCTCGAGCTTCTAACAGGAAGAAAAGCCATGGATAAGATGTCCTCAGACCAATACCAATCCATTGTCACATGGGCCATGCCTCAGCTAACTGACAGATCAAAACTTCCAAGTATTATAGATCCTGTCATCAGAAACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCTGTGGCTGTACTTTGTGTACAACCAGAACCGAGTTATCGGCCGCTAATAACCGATGTCCTGCACTCTCTCATCCCTTTGGTGGCCATGGAGCTGGGAGGTTCCCTCAGAGTTTCAGAACCAGTCTGCTCTGAGAATTAG 1260 0.4103 MKNFLVLFLLIWVSSFSPSVSHFFANAEAESPGAAEARVGHHQNLNNRIIIALAVCSALLVSIFLFLTYIWCYRHKIFKVPSSKSPETIEAAKGVSLSPVDAKFNYSKMADKKSSIAIFDFQLLEVATNSFAKSNILGESRSRLMYSACFDEHLKAAVKKADSSADREFENEVNWLSKIRHQNIIKLLGYCIHGESRFLVYEMVENGSLETQLHGPSHGSSLNWDLRLKIAVDVARALEYLHEHSNPPMVHRDLKSSNVLLDSHFNAKLSDFGLAVSSGMQDKNIKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKAMDKMSSDQYQSIVTWAMPQLTDRSKLPSIIDPVIRNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVAMELGGSLRVSEPVCSEN 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00687 419 Gene3D Phosphorylase Kinase; domain 1 96 203 - -
Accr6g00687 419 FunFam probable receptor-like protein kinase At1g80640 204 402 - -
Accr6g00687 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Accr6g00687 419 PANTHER OS01G0750732 PROTEIN 28 401 - -
Accr6g00687 419 Gene3D Transferase(Phosphotransferase) domain 1 204 404 - -
Accr6g00687 419 Pfam Protein tyrosine and serine/threonine kinase 152 360 IPR001245 GO:0004672|GO:0006468
Accr6g00687 419 ProSiteProfiles Protein kinase domain profile. 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00687 419 SMART serkin_6 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00687 419 SUPERFAMILY Protein kinase-like (PK-like) 109 397 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00687 Accr-Chr6 13113845 13117062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00687 10 343 Receptor kinase-like Gene Family AT1G80640 46.471 3.54e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Accr6g00687 PK_Tyr_Ser-Thr 9.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00687 - - gmx:100811491 632.098