Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00678 ATGGCAGCGTCAAGTGCAGCTACGAAGGTTTGCGTAACTGGTGCCGGAGGCTTTCTGGCGTCGTGGCTTGTTAAGCTTCTCCTCTCCAAGCACTATTTTGTTCATGGCACCGTCAGACAACCTGGAGATCAGAAGTATGATCACTTGCTTAAATTCGAGGGAGCATCGGAGAACCTAAAGCTCTTCAAGGCTGAACTCTTAGATTACGAGTCTATTTCTTCAGCAATTGCTGGTTGTAGAGCAGTTTTCCATGTTGCTTGTCCTGTGCCTTCTACAACTGTATCCAATCCTGAGGCAAAAATGATTGAGCCTTCTGTGAGGGGCACTACTAATATCCTCAAAGCTTGTCTAGAAGCAAAAGTGGAACGGGTTGTCTTTGTATCTTCTCAAGCCGCTGTTTCCATGAACCCAAACTTGCCAAAGGATAAATTAATTGATGAGTCTTGCTGGTCTGATAAAGAGTACTGCAGAAGAACAAAGAACTGGTATTGTTATTCCAAGACAGAGGCAGAGTTGCAGGCCCTAGAGCTTGCCAGAAACACTGGGCTCTCAGTGGTAACTATTTGTCCTGCAGTGGTGTGGGGGCCAATTTTGCAGGCATCCACAGTCAATGCAAGTAGCTTGATCCTCCTCAAGCTATTTAAAGGTCTTGAATCACTGGAGAATAAACAACGGTGGGTTGTAGACGTGCGTGATGTAGCCGATGCAATACTGATGGCTTATGAGAAGCCTGAGGCAGAGGGCAGATACTTATGCACTTCACATTCAATCATGACAGATGACTTGGTGGAAAAGCTAAGGCGTATATACCCAAACTATAGCTACCCTAAAAGCTTTGTTGAAGTGGATAACTGCAAAAAGGTGAGCTCAGAGAAACTACAGAGGTTGGGTTGGAAATACAGGCCGTTGGAAGAAACACTAGTTGATTCTGTTGAGAGCTACAAGGCCGCAGGGCTTCTGGAATCAAAATAA 972 0.4527 MAASSAATKVCVTGAGGFLASWLVKLLLSKHYFVHGTVRQPGDQKYDHLLKFEGASENLKLFKAELLDYESISSAIAGCRAVFHVACPVPSTTVSNPEAKMIEPSVRGTTNILKACLEAKVERVVFVSSQAAVSMNPNLPKDKLIDESCWSDKEYCRRTKNWYCYSKTEAELQALELARNTGLSVVTICPAVVWGPILQASTVNASSLILLKLFKGLESLENKQRWVVDVRDVADAILMAYEKPEAEGRYLCTSHSIMTDDLVEKLRRIYPNYSYPKSFVEVDNCKKVSSEKLQRLGWKYRPLEETLVDSVESYKAAGLLESK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00678 323 Gene3D - 2 323 - -
Accr6g00678 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 311 - -
Accr6g00678 323 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 321 - -
Accr6g00678 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
Accr6g00678 323 Pfam NAD dependent epimerase/dehydratase family 10 247 IPR001509 -
Accr6g00678 323 CDD FR_SDR_e 10 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00678 Accr-Chr6 13030888 13051007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00678 9 321 Monolignol Biosynthesis Gene Families AT2G33590 61.783 1.07e-145 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00678 - - pcin:129287473 534.258