Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00646 ATGGATCAAGTCGGGGGAATCATATGGGACATTACCAAGTGTCTGTGTGGTTGTGCCAAGAAAGAAGCTGATTATATTTACAAGCTGGAAGAGAATTTGGAGTCACTGAAAGATAAATGGAAAGATCTCCAAAGCATGAAAGAGGATTTGAAGACAAGAGTTGATGAAGCTGAGAACACACAAGGGATGCAAATAGCGCACGAAATCAAAAGATGGCTGGAAAAAGTTGACAACATTCAACAACAGGAAATAACAGATATTGAAGTCCAAGCCAAGGAAATTCAAGACAAATGCCTAAGTAAATGTTGCCCCAAGAATTGTAAGTCAAGCTACAAGCTAGGAAAAAAAACTGCTAAGATGGTCAATAATGTAGATAATTTAGCGGCAGAGGGGAAAAGATATAGTGAAAATTTCATAATTGCTCACAAAAGACCACCCAAGCCAATTGAAATGCCTCTGGATGAAGTAGTGGGATTGGATTTGATGTTTAACAAGGTATGGAAGAGTATTGAAGAAGAGAATGTCGACATCATTGGTTTATATGGGATGGGTGGGGTAGGGAAGACTACCCTTCTAAAGACAATAAACAATGAACTTGGGAAGAGAATGTCAGGATTTAATTTTGTGATATGGATTGTGGTGTCAAAAGAGCCCAACTTGGATAGTATTATGGATAATATTAGAAAATTAGTTGGGATCGGGGATGACTTTTGGACTGATTGCAGTGATCAAGATCAAAAAGCAGCAAAGATATATGGAGTCCTTAAAGAAAAGAAATTTGTCTTATTATTGGATGACATATGGGATCAATTGGACTTGAAATTAGTGGGAGTGCCGCATCCAAAGGATACTAAATCTAAAGTGTTATTCACAACACGGTTAGAAAATGTGTGCTCAAAAATGCAAGTTCAAAAAAAATTCAAGGTTGAAATTTTAACAGAGAAGGAAGCACTTGAGTTGTTTTGCATGAAAGTTGGTGAAGAAACTCTAAACTCACACCCAAACATTCCAAGGCTAGCAAAAAAGATGGCAAAGGAATGTAAAGGGCTACCCCTTGCATTGATTGTTCTAGGAAGTAGCATGGCCGGAGTGAAGAGTGTTGAATATTGGGAACATTCAATAAAGAACTTAACAAGTTCTTTGTTGACTGCACCAGATTTGGAGACGAAAGTATACTCTATCCTCAAATATAGCTATGACAAATTGGATGCCGTACAAAAACAATGTTTCTTATACTGTGCATTCTACCCAGAAGATTATGAGATTCTAGTTTCTGTTCTCATCGATAAATGGATGTGGGATAAATTTCTTTGTAAAGATATAACAATGAGTGTTGAAGATATACGTGGTCATGGTGAGTCTGTTATTGAAAAGTTAAAGCTTTCGTGCTTGCTAGAAAGTTTTGAAGATGATCTTTTTGTATCTCGTACAGTTAAAATGCATGATGTGATTCGTGACATGGCATTGTGGTTATTAGAAGAAGATCATGATAATATGGAACTTGTGAAGAGGATTTCGATCATATATGATTGGGAGTCACAAAAAAGTATAGATCTTGCAAATGTCACAACATTAGTTTTATTGGGAGGGATACACCATCAGCTGAAAGATATTAAATACATGGAGAGATTAAAAGTCTTGGAACTACATGTCGAGGATCTAGCATTTGTAGACATTGGGGGTTTAACTTCTCTGGAATATCTTTCTTTTCATTTTTGGCGTGCATCTTTAGAACCCCGGTTTTGGATCAACTTAAAGTCCTTGACAAATTTAAAATTTTTGAGCTTTCTAGCGACATCTCTTTCTTTCTCGACATGGGAGAGTCCACTGGGAGTGCTATCATGCCTTCAACAATTGAGAGTGTTTAGACTTGTTGGCAAGATCAAAATAAACCCATTAGAAGAGAGAAGAATTTTAGAAGAGCTGGAGTGCCTGCCAAAGATTGAGGAATTACGGATAATTATCTCCAGTAGAAACGGCCTAGACAAATTATTGGAGTCAGCCAAATTACAAAGTTGCTTATACAATATTTCTACTGATCTCAGCTACTCGGATGTGTCGAATGAGAAGCCTTTATTATCATTAGGCTCCATGTCAGGATTAAAGAAGCTGCAGGAAATTTTTTTATTTAAGATCAATATTAGAAGCGATCAATATCCTTTTATGCTTGAAACATGTTGGCTAGTCAAGCTCCGAATGGTGGAAATTACTTCGTGTCAAGTAACTCATGTGACATGGCTCAAGTATGCTCCACTCCTTCAACAACTTGAGATTAATAGATGTGAATCAATGGAAGAAGTGATAAAAGAGGAAGAAGCAATAAAGGATGAGAATGTGGATTCTTCTCCTATATTCGATTCTCTTGTTGAGCTGAGTTTGGAGGAGTTACCAATACTTAAGAGCATTCACAGGGCACCCTTACCTTTTCCTTCCCTCAAATTCGTTGTCATAGATAGTTGTCCAAAGCTGGAAAAGTTACCATTTGATTCCAACTCTGCCAAACATAAGTTGACATTTATCCGTGGACAACAAAATTGGTGGGACAGTTTGAAATGGGATGACCCCACAGCCAAGGACAAATTCCAATCAAAGTTCAAAATTTATTAA 2607 0.3713 MDQVGGIIWDITKCLCGCAKKEADYIYKLEENLESLKDKWKDLQSMKEDLKTRVDEAENTQGMQIAHEIKRWLEKVDNIQQQEITDIEVQAKEIQDKCLSKCCPKNCKSSYKLGKKTAKMVNNVDNLAAEGKRYSENFIIAHKRPPKPIEMPLDEVVGLDLMFNKVWKSIEEENVDIIGLYGMGGVGKTTLLKTINNELGKRMSGFNFVIWIVVSKEPNLDSIMDNIRKLVGIGDDFWTDCSDQDQKAAKIYGVLKEKKFVLLLDDIWDQLDLKLVGVPHPKDTKSKVLFTTRLENVCSKMQVQKKFKVEILTEKEALELFCMKVGEETLNSHPNIPRLAKKMAKECKGLPLALIVLGSSMAGVKSVEYWEHSIKNLTSSLLTAPDLETKVYSILKYSYDKLDAVQKQCFLYCAFYPEDYEILVSVLIDKWMWDKFLCKDITMSVEDIRGHGESVIEKLKLSCLLESFEDDLFVSRTVKMHDVIRDMALWLLEEDHDNMELVKRISIIYDWESQKSIDLANVTTLVLLGGIHHQLKDIKYMERLKVLELHVEDLAFVDIGGLTSLEYLSFHFWRASLEPRFWINLKSLTNLKFLSFLATSLSFSTWESPLGVLSCLQQLRVFRLVGKIKINPLEERRILEELECLPKIEELRIIISSRNGLDKLLESAKLQSCLYNISTDLSYSDVSNEKPLLSLGSMSGLKKLQEIFLFKINIRSDQYPFMLETCWLVKLRMVEITSCQVTHVTWLKYAPLLQQLEINRCESMEEVIKEEEAIKDENVDSSPIFDSLVELSLEELPILKSIHRAPLPFPSLKFVVIDSCPKLEKLPFDSNSAKHKLTFIRGQQNWWDSLKWDDPTAKDKFQSKFKIY 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00646 868 Gene3D - 153 309 IPR027417 -
Accr6g00646 868 PRINTS Disease resistance protein signature 177 192 - -
Accr6g00646 868 PRINTS Disease resistance protein signature 254 268 - -
Accr6g00646 868 PRINTS Disease resistance protein signature 347 361 - -
Accr6g00646 868 PRINTS Disease resistance protein signature 748 764 - -
Accr6g00646 868 SMART AAA_5 174 331 IPR003593 GO:0016887
Accr6g00646 868 FunFam Probable disease resistance protein At5g66910 311 398 - -
Accr6g00646 868 SUPERFAMILY L domain-like 479 843 - -
Accr6g00646 868 Gene3D - 311 398 IPR042197 -
Accr6g00646 868 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 827 - -
Accr6g00646 868 Gene3D - 399 489 IPR036388 -
Accr6g00646 868 Pfam NB-ARC domain 162 400 IPR002182 GO:0043531
Accr6g00646 868 Coils Coil 26 60 - -
Accr6g00646 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 413 IPR027417 -
Accr6g00646 868 FunFam Probable disease resistance protein At1g63360 399 490 - -
Accr6g00646 868 Gene3D Ribonuclease Inhibitor 493 845 IPR032675 -
Accr6g00646 868 FunFam Probable disease resistance protein At1g61300 141 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00646 Accr-Chr6 12514342 12521924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00646 155 427 WRKY Transcription Factor Family AT5G45050 24.199 5.53e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00646 - K13459 adu:107480591 602.438