Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00638 ATGTCAGGTTCTGAGGTAGAAGATAAGAGAGGAATGGATTTGAGTAGAGAATTTGTGGCAGGAGGGGTAGGGGGTGTGGCTGGAGTGATATCTGGTTATCCACTAGACACCCTCCGAATCCTCCTACAGAATTCAAACATGGCAACTTCTGTGTTCAGCTTAATCAAAAATATGGTGTCCAAGGAAGGCCCTGCTTCTCTCTACAGAGGCATGGCTGCTCCTTTGGCTGCTATTACTTTTCAGAATGCTATGATTTTCCAAACCTACGCAGTTCTCTCAAGAGCTTTTCACTCATCAGTCTCAGCAAACAACCCTCCTTCCTACAACAGCATTGCTCTAGCAGGATTCATAACCGGTGCTTTACAGAGCACGATTGTGTCCCCAGTAGAACTAGTCAAAATCCGCCTCCAGCTACAAAGCAAGGGCCAATTAACAGAATTCTATAAAGGTCCTTTATCAATGACAAGGAAGATATGGAATAGAGAAGGTCTTAGAGGAATATTCCGAGGATTTGGCATCACTGTCCTCAGGGATGCACCTAGCCATGCCGTATATTTCTGGACATACGAGTATATGAGGGAACAACTTCACCCTGGTTGCAGAAACACTAGTCAAGAAAGCTTAAGTACAATGGTAATAGCAGGAGGATTAGCTGGGGTAGTGAGTTGGATCGGCTGTTATCCTTTTGATGTTATAAAGACAAGACTCCAGGCTCAAACACAGTCATCATTGAGATACACAGGCATTCTTGATTGCCTGGCAAAGAGCGTAAGAGAAGAAGGACATTGTGTTTTGTGGAGGGGGATGGGAACTGCAGTGGGTAGAGCTTTTATAGTGAATGGTGCTGTGTTTGCTGCTTATGAGATTGCTATGAGAAGCCTGTCAAACAATGGTAGTGGTAGCACTAACAATATAGGAGATCTATCATTTACTAGGAACAAAAGACAATCAGACAACAATCAAACAAGTGTCCAGGAAACAAATAGAAGCAAGATTTCACATTTGACCATCATTGCCCAATGTACCTGTCGTATGGAATGTCTGAGGATGTTTAATGCAAAGTTGGCAAGTTGTATGATTGCAGTACTCATAAGTTTAGCAAATTAG 1107 0.4291 MSGSEVEDKRGMDLSREFVAGGVGGVAGVISGYPLDTLRILLQNSNMATSVFSLIKNMVSKEGPASLYRGMAAPLAAITFQNAMIFQTYAVLSRAFHSSVSANNPPSYNSIALAGFITGALQSTIVSPVELVKIRLQLQSKGQLTEFYKGPLSMTRKIWNREGLRGIFRGFGITVLRDAPSHAVYFWTYEYMREQLHPGCRNTSQESLSTMVIAGGLAGVVSWIGCYPFDVIKTRLQAQTQSSLRYTGILDCLAKSVREEGHCVLWRGMGTAVGRAFIVNGAVFAAYEIAMRSLSNNGSGSTNNIGDLSFTRNKRQSDNNQTSVQETNRSKISHLTIIAQCTCRMECLRMFNAKLASCMIAVLISLAN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00638 368 PRINTS Mitochondrial carrier protein signature 266 284 IPR002067 GO:0055085
Accr6g00638 368 PRINTS Mitochondrial carrier protein signature 111 124 IPR002067 GO:0055085
Accr6g00638 368 PRINTS Mitochondrial carrier protein signature 221 239 IPR002067 GO:0055085
Accr6g00638 368 PRINTS Mitochondrial carrier protein signature 124 138 IPR002067 GO:0055085
Accr6g00638 368 PRINTS Mitochondrial carrier protein signature 170 190 IPR002067 GO:0055085
Accr6g00638 368 Pfam Mitochondrial carrier protein 112 196 IPR018108 -
Accr6g00638 368 Pfam Mitochondrial carrier protein 15 98 IPR018108 -
Accr6g00638 368 Pfam Mitochondrial carrier protein 207 297 IPR018108 -
Accr6g00638 368 SUPERFAMILY Mitochondrial carrier 12 288 IPR023395 -
Accr6g00638 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 95 IPR018108 -
Accr6g00638 368 MobiDBLite consensus disorder prediction 308 327 - -
Accr6g00638 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 293 IPR018108 -
Accr6g00638 368 Gene3D Mitochondrial carrier domain 15 309 IPR023395 -
Accr6g00638 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 106 195 IPR018108 -
Accr6g00638 368 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 13 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00638 Accr-Chr6 12347332 12349097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00638 12 307 Antiporters AT1G79900 57.705 3.19e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00638 K15109 - gmx:100812056 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00638 6 12347332 12349097 Accr6g00638 6 12347332 12349097 ECH