Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00623 ATGTCTTCGCCGTCTCCGGTAACATCTCCATCTGCCAACTCCACGGTTCCTCCTCCTCCTCCTCCTCCTGATGCCACCACCACCAATGACACTTCTCCCTCAACTCAGAGTAATTCCATGTCACCTACCGCCACTCCGTCGCCGGAATCAGACGGAATGTCCAAAGCTACATTAACTGGACTAGTTGTCGGGACTGTATTTGGCTCGCTGCTTATGCTCGTTCTTGTGGGCATTTGCGCTTTTTTCTATAAAAGGAGGAAGCGGAGGAGGATGAGAAAATATGGTTTGGACGATTGCTCTGCTGCTCCTCCACCTCAACCCAAAGCTGATCAGTTTGGTGGTCTGCCCCAGCAATGGCAGAGTAACATTCCTCCTCCAACTGATGGTGGCAAGCCAAGTCCACCCCTTGGAGTTTGGATGAATCAGAAAGCATCATCTCATAATGTCGCATCTTCTCCTATGTATTCTACAAGTGGCCCTAGTTTGGAATCCGAGAGACCACAGCATACGCAATCTGCTGCCATTATTACATTGGGACTGTCACAAATCTCGTTTACATATGAAGAACTTGCATTTGCAACAAATGGATTCTCAAACTCAAATCTTCTTGGTCAAGGTGGGTTTGGCTATGTCCATAAAGGAGTCCTCCCAAATGGAAAAACTGTTGCAATTAAGCAGCTGAAATCTGGGAGCAGACAGGGGGAGCGTGAATTCCAGGCTGAAGTGGAGGTGATTAGCCGAGTCCATCACAGACATCTTGTTTCCTTGGTTGGATACTGCATTGCTGGAACCCAGAGGATGCTTGTATATGAGTTTGTTCCAAACAATACACTAGAATTCCATTTGCATGGAAAAGATGGAACAGCAATGGACTGGGCAACAAGGATAAAAATTGCTATTGGATCTGCAAAGGGATTGGCATATCTGCATGAGGACTGTCACCCAAGAATCATACATCGAGACATCAAGGCATCTAACATTCTTCTTGATGACAATTTTGAGGCCAAGGTTGCAGATTTTGGACTTGCCAAAATTTCATCAGATGTAGATACCCATGTCTCCACTCGAGTAATGGGAACCTTTGGATACCTGGCTCCAGAATATGCTGCTAGTGGAAAACTCACTGAGAAGTCAGATGTCTTCTCCTTTGGTGTTATGCTTTTGGAGTTGATTACTGGACGAAGACCTGTTGATAAAACTGAGTCTTTTACAGATGACAGTATGGTGGAGTGGGCAAGACCTTTACTTTTTCAAGCCATGGAAAATAGAAACTTCGATGCTCTTGCTGATCCAAGGTTGCAGGAGAGTTACGACTCTGATGAGATGCTTCGAATGATTGCCTGTGCTGCAAATTGTGTGCGCCATTCAGCTAAGCAACGGCCTCGAATGAGCCAGGTGGTTCGGGCTCTAGAAGGCAATATTTCTTTGGATGATCTGAATGAGGGTAACACACCTGGGCACAGCAGAGCATTTAGTTCCTTTGAAATTTCAGGTTATGATACTGGTCAATACAACGAGGACCTAAAGAAGTTCAGGAAGTTGGCATTAGAGCAAGAAACTAGTGAATACAGTGGACCTAGTAGCGATTATGGCAAACACCAATCTGCCTCAAGCAGTTCAGGCCTGCAAAATGAACCAGAGAAATAA 1647 0.4548 MSSPSPVTSPSANSTVPPPPPPPDATTTNDTSPSTQSNSMSPTATPSPESDGMSKATLTGLVVGTVFGSLLMLVLVGICAFFYKRRKRRRMRKYGLDDCSAAPPPQPKADQFGGLPQQWQSNIPPPTDGGKPSPPLGVWMNQKASSHNVASSPMYSTSGPSLESERPQHTQSAAIITLGLSQISFTYEELAFATNGFSNSNLLGQGGFGYVHKGVLPNGKTVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCIAGTQRMLVYEFVPNNTLEFHLHGKDGTAMDWATRIKIAIGSAKGLAYLHEDCHPRIIHRDIKASNILLDDNFEAKVADFGLAKISSDVDTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVMLLELITGRRPVDKTESFTDDSMVEWARPLLFQAMENRNFDALADPRLQESYDSDEMLRMIACAANCVRHSAKQRPRMSQVVRALEGNISLDDLNEGNTPGHSRAFSSFEISGYDTGQYNEDLKKFRKLALEQETSEYSGPSSDYGKHQSASSSSGLQNEPEK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00623 548 Gene3D Phosphorylase Kinase; domain 1 159 272 - -
Accr6g00623 548 SMART serkin_6 197 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00623 548 MobiDBLite consensus disorder prediction 1 53 - -
Accr6g00623 548 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 70 516 IPR047117 -
Accr6g00623 548 MobiDBLite consensus disorder prediction 96 169 - -
Accr6g00623 548 Gene3D Transferase(Phosphotransferase) domain 1 273 483 - -
Accr6g00623 548 FunFam proline-rich receptor-like protein kinase PERK1 175 272 - -
Accr6g00623 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Accr6g00623 548 ProSitePatterns Protein kinases ATP-binding region signature. 203 225 IPR017441 GO:0005524
Accr6g00623 548 MobiDBLite consensus disorder prediction 139 169 - -
Accr6g00623 548 Pfam Protein tyrosine and serine/threonine kinase 200 470 IPR001245 GO:0004672|GO:0006468
Accr6g00623 548 FunFam Proline-rich receptor-like protein kinase PERK1 273 481 - -
Accr6g00623 548 MobiDBLite consensus disorder prediction 28 53 - -
Accr6g00623 548 ProSiteProfiles Protein kinase domain profile. 197 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00623 548 SUPERFAMILY Protein kinase-like (PK-like) 176 470 IPR011009 -
Accr6g00623 548 MobiDBLite consensus disorder prediction 11 27 - -
Accr6g00623 548 MobiDBLite consensus disorder prediction 519 548 - -
Accr6g00623 548 MobiDBLite consensus disorder prediction 520 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00623 Accr-Chr6 12085139 12089760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00623 20 545 Trihelix Transcription Factor Family AT1G70460 50.467 3.90e-165 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr6g00623 PK_Tyr_Ser-Thr 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00623 - - aip:107617256 701.819