Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00622 ATGTCTTCTTCATCACCCTCTCCGGTTACTCCTCAAGACGCCAGCCAGCCATACCGCCACCTCCTCCCCTCCTACAGTATTTATGACTACTCTACAGATGAGTCTCCCTCACCGTCTCCCTTGCCGACTCCCGGCGGTAACACTCCCGCGTCGTTTCCCCCTGGTGGAGGCGGTATATTACTGGGGGCTTTGCTTAGTTCACTGATGACCGTGCTGCTGATGAGTTTGGTAGTTGGTGCCGCTTACTATATATGGAGAAAGAGGAGGCACTCATCACAACCACCAAACCAACCAGATAACCAGGTTCCACTTGTTCCTCTACCATCTTCCATGGTCTTTGAACACTCACCAGGCACATTTACGTATGAAGAATTAGAATTGGCCACAGAAGGGTTCTCAGAGTCAAATTTTCTGGGGCAAGGTGGTTTTGGGACTGTCCACAAAGGAATCCTCCCTAATAAACAAACTGTGGCTATCAAGCAGCAAAAATCTGGAAGCAAACAAGGACTGCTAGAGTTTCAGACTGAAGTCAACGTCATCAGTCGAGTCCACCACAGACATCTGGTTTCCCTTGTTGGATACTGTATTGCTAAAGCTCAGATCACGTTGATGCTTGTTTATGAGTTTGTCCCAAATAAAACCCTAGACTTCCATCTCCATGAAAAAGGAATAGAAACTCTAGATTGGTCAACAAGGATGAAGATAGCTACTGGCTCTGCAAAAGGATTGGCATATCTGCATGAAGACTGTGAACCCAAAACCATACATCGTGATGTCAAGGCAGCTAACATTCTTCTTGATAACAATTTTGAGCCTAAGATTGCAGATTTTGGACTTGCCAAACTTTCATCAGACACTGATACCCATGTCTCTACAGCAAAAATAAAGGGAACCTTTGGATACTTAGCTCCAGAATATGCAAATAGCGGGAAACTCTCAGAGAAGGCAGATGTCTTTTCCTTTGGTGTTGTGCTCTTAGAGTTGATTGCTGGACGAAAACCTGTTCTTCAAACTGGCTCTTTCACAGATGACAGTCTAGTTGAGTGGGCAAGGCCTTTACTATCCACAGCTTTGGGAAATCGAAATTTTGAGGTTCTAGCTGATCCAAGGTTGCAGAACAATTACAACTCTGAAGAGATGTTTCGAATGGCTTCTTGTGCTGCAAATTGCGTGCGTCATTCACCCGACCATCGTCCTCGAATGAGTCAGGTAGTGGATGCTTTAACAGGAAAGATTAATCTGGATAATTGGAACGAGGAGAGCACACAAGTGGACAACCAAGACCTGAACAAGTTTTGGAAGCAGTCACTAGGCGAGTTCGACGAGCCTACCAGTTCAAGCCTCGAAAATACAACTGAAGCCTCTTCTTACTCAGCTTCTGGTTAA 1386 0.4538 MSSSSPSPVTPQDASQPYRHLLPSYSIYDYSTDESPSPSPLPTPGGNTPASFPPGGGGILLGALLSSLMTVLLMSLVVGAAYYIWRKRRHSSQPPNQPDNQVPLVPLPSSMVFEHSPGTFTYEELELATEGFSESNFLGQGGFGTVHKGILPNKQTVAIKQQKSGSKQGLLEFQTEVNVISRVHHRHLVSLVGYCIAKAQITLMLVYEFVPNKTLDFHLHEKGIETLDWSTRMKIATGSAKGLAYLHEDCEPKTIHRDVKAANILLDNNFEPKIADFGLAKLSSDTDTHVSTAKIKGTFGYLAPEYANSGKLSEKADVFSFGVVLLELIAGRKPVLQTGSFTDDSLVEWARPLLSTALGNRNFEVLADPRLQNNYNSEEMFRMASCAANCVRHSPDHRPRMSQVVDALTGKINLDNWNEESTQVDNQDLNKFWKQSLGEFDEPTSSSLENTTEASSYSASG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00622 461 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 72 434 IPR047117 -
Accr6g00622 461 FunFam proline-rich receptor-like protein kinase PERK8 210 423 - -
Accr6g00622 461 SUPERFAMILY Protein kinase-like (PK-like) 106 408 IPR011009 -
Accr6g00622 461 ProSitePatterns Protein kinases ATP-binding region signature. 138 160 IPR017441 GO:0005524
Accr6g00622 461 SMART serkin_6 132 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00622 461 Pfam Protein tyrosine and serine/threonine kinase 136 408 IPR001245 GO:0004672|GO:0006468
Accr6g00622 461 Gene3D Phosphorylase Kinase; domain 1 104 209 - -
Accr6g00622 461 MobiDBLite consensus disorder prediction 28 50 - -
Accr6g00622 461 MobiDBLite consensus disorder prediction 440 461 - -
Accr6g00622 461 Gene3D Transferase(Phosphotransferase) domain 1 210 435 - -
Accr6g00622 461 ProSiteProfiles Protein kinase domain profile. 132 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00622 461 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 108 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00622 Accr-Chr6 12043194 12074712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00622 108 448 Trihelix Transcription Factor Family AT1G70460 57.429 2.15e-129 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr6g00622 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00622 - - pcin:129289307 459.914