Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00621 ATGACACACTTGAATCTTCGCCGGTCGGCAATGTCTTCTTCATCACCCTCTCCGGTTACTCCTCAAGACGCCAGCCAGCCATACCGCCACCTCCTCCCCTCCTACAGTATTTATGACTACTCTACAGATGAGTCTCCCTCACCGTCTCCCTTGCCGACTCCCGGCGGTAACACTCCCGCGTCGTTTCCCCCTGGTGGAGGCGGTATATTACTGGGGGCTTTGCTTAGTTCACTGATGACCGTGCTGCTGATGAGTTTGGTAGTTGGTGCCGCTTACTATATATGGAGAAAGAGGAGGCACTCATCACAACCACCAAACCAACCAGATAACCAGGTTCCACTTGTTCCTCTACCATCTTCCATGGTCTTTGAACACTCACCAGGCACATTTACGTATGAAGAATTAGAATTGGCCACAGAAGGGTTCTCAGAGTCAAATTTTCTGGGGCAAGGTGGTTTTGGGACTGTCCACAAAGGAATCCTCCCTAATAAACAAACTGTGGCTATCAAGCAGCAAAAATCTGGAAGCAAACAAGGACTGCTAGAGTTTCAGACTGAAGTCAACGTCATCAGTCGAGTCCACCACAGACATCTGGTTTCCCTTGTTGGATACTGTATTGCTAAAGCTCAGATCACGTTGATGCTTGTTTATGAGTTTGTCCCAAATAAAACCCTAGACTTCCATCTCCATGAAAAAGGAATAGAAACTCTAGATTGGTCAACAAGGATGAAGATAGCTACTGGCTCTGCAAAAGGATTGGCATATCTGCATGAAGACTGTGAACCCAAAACCATACATCGTGATGTCAAGGCAGCTAACATTCTTCTTGATAACAATTTTGAGCCTAAGATTGCAGATTTTGGACTTGCCAAACTTTCATCAGACACTGATACCCATGTCTCTACAGCAAAAATAAAGGGAACCTTTGGATACTTAGCTCCAGAATATGCAAATAGCGGGAAACTCTCAGAGAAGGCAGATGTCTTTTCCTTTGGTGTTGTGCTCTTAGAGTTGATTGCTGGACGAAAACCTGTTCTTCAAACTGGCTCTTTCACAGATGACAGTCTAGTTGAGTGGGCAAGGCCTTTACTATCCACAGCTTTGGGAAATCGAAATTTTGAGGTTCTAGCTGATCCAAGGTTGCAGAACAATTACAACTCTGAAGAGATGTTTCGAATGGCTTCTTGTGCTGCAAATTGCGTGCGTCATTCACCCGACCATCGTCCTCGAATGAGTCAGGTAGTGGATGCTTTAACAGGAAAGATTAATCTGGATAACCAAGACCTGAACAAGTTTTGGAAGCAGTCACTAGGCGAGTTCGACGAGCCTACCAGTTCAAGCCTCGAAAATACAACTGAAGCCTCTTCTTACTCAGCTTCTGGTTAA 1386 0.4545 MTHLNLRRSAMSSSSPSPVTPQDASQPYRHLLPSYSIYDYSTDESPSPSPLPTPGGNTPASFPPGGGGILLGALLSSLMTVLLMSLVVGAAYYIWRKRRHSSQPPNQPDNQVPLVPLPSSMVFEHSPGTFTYEELELATEGFSESNFLGQGGFGTVHKGILPNKQTVAIKQQKSGSKQGLLEFQTEVNVISRVHHRHLVSLVGYCIAKAQITLMLVYEFVPNKTLDFHLHEKGIETLDWSTRMKIATGSAKGLAYLHEDCEPKTIHRDVKAANILLDNNFEPKIADFGLAKLSSDTDTHVSTAKIKGTFGYLAPEYANSGKLSEKADVFSFGVVLLELIAGRKPVLQTGSFTDDSLVEWARPLLSTALGNRNFEVLADPRLQNNYNSEEMFRMASCAANCVRHSPDHRPRMSQVVDALTGKINLDNQDLNKFWKQSLGEFDEPTSSSLENTTEASSYSASG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00621 461 FunFam proline-rich receptor-like protein kinase PERK8 220 434 - -
Accr6g00621 461 ProSitePatterns Protein kinases ATP-binding region signature. 148 170 IPR017441 GO:0005524
Accr6g00621 461 ProSiteProfiles Protein kinase domain profile. 142 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00621 461 SMART serkin_6 142 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00621 461 Gene3D Phosphorylase Kinase; domain 1 114 219 - -
Accr6g00621 461 MobiDBLite consensus disorder prediction 39 60 - -
Accr6g00621 461 SUPERFAMILY Protein kinase-like (PK-like) 116 418 IPR011009 -
Accr6g00621 461 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 118 219 - -
Accr6g00621 461 Pfam Protein tyrosine and serine/threonine kinase 146 418 IPR001245 GO:0004672|GO:0006468
Accr6g00621 461 MobiDBLite consensus disorder prediction 1 27 - -
Accr6g00621 461 Gene3D Transferase(Phosphotransferase) domain 1 220 437 - -
Accr6g00621 461 MobiDBLite consensus disorder prediction 440 461 - -
Accr6g00621 461 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 82 431 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00621 Accr-Chr6 12043194 12074742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00621 118 448 Trihelix Transcription Factor Family AT1G70460 56.000 4.65e-127 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr6g00621 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00621 - - pcin:129289307 455.677