Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00618 ATGAAGATTGCTATTGGCTCTGCAAAAGGATTGGCTTATCTGCATGAAGAATGTGAACCGAAAATCATACACCGTGACATCAAGGCAACAAATATTCTCGTCGATGACAGATTTGAGCCAAAGGTTGCAGATTTTGGACTGGCCAGAATTTCACCCGAATCCCAGATCTGGACTCAAACAATAATGGGAACTTGTGGATACTTAGCACTAGAATATGCAACTGCTGGTAACCTCACAGCGAAGGTGGATGTGTACTCCTTTGGTGTTGTGCTTTTGGAGTTAATTACTGGCCGTAAGCCTGTTGGCGATGCTGGGATTTTTCCAAATGGCAGTATCGTTGAGTGGGTCCGTACTGTTTAA 360 0.4389 MKIAIGSAKGLAYLHEECEPKIIHRDIKATNILVDDRFEPKVADFGLARISPESQIWTQTIMGTCGYLALEYATAGNLTAKVDVYSFGVVLLELITGRKPVGDAGIFPNGSIVEWVRTV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00618 119 SUPERFAMILY Protein kinase-like (PK-like) 2 106 IPR011009 -
Accr6g00618 119 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00618 119 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 118 IPR047117 -
Accr6g00618 119 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Accr6g00618 119 Pfam Protein kinase domain 7 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00618 119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00618 Accr-Chr6 11970789 11972836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00618 1 117 Trihelix Transcription Factor Family AT1G70460 64.407 1.87e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr6g00618 Pkinase 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00618 - - pcin:129289322 174.481