Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00602 ATGGGCGTGGACATGTCCAATAACCCACCTCCATCTTCTCACACTAAAGACTTCTTTGCTTCTCCTGCTCTTTCTCTCAGTCTCGCTGGGATTTTCCGGCATGCCGGAGACGCTGCTGCAGCGGCGGGGGCCGGCACATCCAGCAGGGAGGTGGAGGTGGAGGAGGGGGATGAAGGGAGTGGCGGCGGCGGCCGGCGGGATGAAACAGTGGAGATTAGCAGCGAGAACTCCGGCCACACGAGATCCAGATCGGACGATATTGATTTTGAAGGAGAAGGCGACGGTGACGACGGAGACGATGGCGATGGAGATAAGAACAAGAAGAAGAAGAGGAAGAAGTATCACAGGCACACTGCTGAACAAATCAGAGAAATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAAAGGCAACAACTTAGCAAGCAATTAGGCCTTGCCCCTAGACAAGTCAAGTTCTGGTTCCAAAATCGTCGCACCCAAATCAAGGCAATACAAGAACGTCATGAGAACTCATTGTTAAAGACCGAAATAGACAAACTGAGAGACGAAAACAAGCAAATGAGAGAGACCATCAACAAATCTTGCTGCCCCAACTGTGGCATGACCACCACTAGCAGAGACACCGTCATGTCCACCGAAGAACAACAACTTCGTATCGAAAATGCCAAACTCAAAGCCGAGGTAGAGAAGTTAAGAGCGGTAGTCGGGAAGTACCCGCAAGGGACGGCGTCACCGTCGTGTTCCGGCGGAGGAAATGACCAAGAGAACCGAAGCTCGTTGGATTTTTACACAGGAATATTTGGGCTGGACAAGACGAGAATAACGGAGATAGTGAACCAAGCTTTGGAGGAGCTGGTGAAAATGGCGACGGTGGGAGAACCATTGTGGGTTCGGAGTTTAGAAACTGATCGTGAGATTCTTAACTACGATGAGTATGTGAAGGAGTTCGGAGCCAGCAAGGTTGATGAAAGTTCTTCTTCAACCACCAGCCATGGAAGTAGGATCAAGAGATCCATCGAAGCTTCCAGAGACACTGGCCTTGTTTTTGTTGATCTTCCTCGCCTCCTTCACAGATTCTTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTGATATCAAAGGCAGCAACTGTAGATGTCATTTGCAGTGGAGATGGAGCTAACAGGAATGGTGCGGTTCATTTGATGTTTGCTGAGCTACAAATGCTAACTCCAATGGTGGCCACAAGAGAAGTGTATTTCGTGAGGTACTGCAAGCAACTCAGTGCAGAGCAGTGGGCCATCGTCGACGTGTCAGTGGACAAGGTTGAAGACAACATCGATGCCTCCCTTGTCAAATGTCGAAAACGCCCCTCTGGCTGCATCATTGAAGATAAGTCTAATGGCCATTGCAAGGTGACGTGGGTGGAGCACTTGGAATGCCAGAAGAGCCCAGTGCATACATTGTACCGCAATATTGTAAACAGGGGCCTGGCTTTTGGTGCAAGGCACTGGATTGCCACTCTCCAACTTCAATGTGAACGTCTGGTTTTCTTCATGGCCACCAATGTTCCCATGAAGGATTCAACTGGTGTTGCAACTTTAGCAGGAAGGAAGAGCATTTTGAAGCTGGCACAGAGAATGATGTGTAACTTCTGCCATGCCGTTGGAGCTTCGAGCTTCCATACATGGAATAAGGCCACCAGCAAAACAGGGGAAGACATCAGACTAAGTTCTAGGAAGAATTTAAATGATCCGGGGGAACCTCTAGGGGTGATCTTGTGTGCAGTTTCTTCTGTGTGGCTGCCAGTTTCTCCTAATTTCCTGTTCGATTTCTTGAAAGATGAAGCTCGCAGATCCGAGTGGGATATCATGTCCAGCAGTGCTTCAGTGCAATCCATAGCAAACTTAGCGAAAGGACAAGATCGAGGCAATTCAGTGACCATCCAAACAATTAAATCAAAAGAGAACAGCATGTGGGTATTACAAGATAGCTGCACAAATGCATATGAATCAATGGTGGTGTACGCACCAGTTGACATCAGTGGGATTCAGTCTGTGATGACAGGATGTGACTCTAGCAATCTAGCCATACTTCCCTCAGGCTTCTCGATTATACCTGATGGGGTGGATGCAAGGCCACTGGTCATAACTTCAAGGGAGGAAGAGAGAAACACAGAAGGAGGATCTTTGCTTACAGTGGCTTTCCAAGTCCTTACTAATACATCTCCTACAGCTAAGATAACAGTGGAGTCTGTGGAATCTGTCAACACTCTTATATCTTGTACATTAAGAAATATCAGAACCAGTTTACAATGTGAGGAGGGTTGA 2325 0.477 MGVDMSNNPPPSSHTKDFFASPALSLSLAGIFRHAGDAAAAAGAGTSSREVEVEEGDEGSGGGGRRDETVEISSENSGHTRSRSDDIDFEGEGDGDDGDDGDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIDKLRDENKQMRETINKSCCPNCGMTTTSRDTVMSTEEQQLRIENAKLKAEVEKLRAVVGKYPQGTASPSCSGGGNDQENRSSLDFYTGIFGLDKTRITEIVNQALEELVKMATVGEPLWVRSLETDREILNYDEYVKEFGASKVDESSSSTTSHGSRIKRSIEASRDTGLVFVDLPRLLHRFLDVNQWKEMFPCLISKAATVDVICSGDGANRNGAVHLMFAELQMLTPMVATREVYFVRYCKQLSAEQWAIVDVSVDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSPVHTLYRNIVNRGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMMCNFCHAVGASSFHTWNKATSKTGEDIRLSSRKNLNDPGEPLGVILCAVSSVWLPVSPNFLFDFLKDEARRSEWDIMSSSASVQSIANLAKGQDRGNSVTIQTIKSKENSMWVLQDSCTNAYESMVVYAPVDISGIQSVMTGCDSSNLAILPSGFSIIPDGVDARPLVITSREEERNTEGGSLLTVAFQVLTNTSPTAKITVESVESVNTLISCTLRNIRTSLQCEEG 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00602 774 MobiDBLite consensus disorder prediction 37 120 - -
Accr6g00602 774 Coils Coil 218 238 - -
Accr6g00602 774 FunFam Homeobox-leucine zipper protein GLABRA 2 280 512 - -
Accr6g00602 774 SMART HOX_1 110 172 IPR001356 GO:0003677
Accr6g00602 774 ProSiteProfiles START domain profile. 271 516 IPR002913 GO:0008289
Accr6g00602 774 ProSiteProfiles 'Homeobox' domain profile. 108 168 IPR001356 GO:0003677
Accr6g00602 774 Pfam Homeodomain 111 166 IPR001356 GO:0003677
Accr6g00602 774 Gene3D - 330 511 IPR023393 -
Accr6g00602 774 CDD homeodomain 115 166 IPR001356 GO:0003677
Accr6g00602 774 Gene3D - 99 180 - -
Accr6g00602 774 SMART START_1 280 513 IPR002913 GO:0008289
Accr6g00602 774 Coils Coil 167 194 - -
Accr6g00602 774 CDD START_ArGLABRA2_like 275 512 - -
Accr6g00602 774 MobiDBLite consensus disorder prediction 50 88 - -
Accr6g00602 774 Pfam START domain 281 513 IPR002913 GO:0008289
Accr6g00602 774 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 107 769 IPR042160 -
Accr6g00602 774 SUPERFAMILY Bet v1-like 535 735 - -
Accr6g00602 774 ProSitePatterns 'Homeobox' domain signature. 143 166 IPR017970 GO:0000981|GO:0006355
Accr6g00602 774 SUPERFAMILY Bet v1-like 273 513 - -
Accr6g00602 774 SUPERFAMILY Homeodomain-like 99 169 IPR009057 -
Accr6g00602 774 FunFam Homeobox-leucine zipper protein HDG1 97 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00602 Accr-Chr6 11838696 11847853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00602 72 773 Homeobox Transcription Factor Family AT1G79840 63.966 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr6g00602 START 1e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00602 K09338 - qsu:111988083 1201.42